Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1462 ATGGAAAGAATTTCCATATGGGTAGTATTTGTGATCACAACCCTTTTCCTCCTAAACACGACCAATTGTGTGGAGGAAGAGGTGAAGATTACACTGATACAATTTCTGGCACAAGTCTCAGGTAACAACAACAGTGGCCAACACAACTCCACTTTGTCTTGGAAACAAGACTCTGATCCATGCAAGGATCAATGGCAAGGTGTGTATTGTGACCCTCAAAACATCTCCATAAAAAGGCTGCTACTTGAACGGCTCAATTTCTCTGGAACTCTTAATGTTGCCATGCTTTGCAACTTGCAGCCTCTTGCTGCATCTCTCACATTTCTCAGCCTAGATGGTAACAAAATCAGTGGCGTGATCGAATCCAAGATTGGAAATTGCAAACAACTCACTCGTTTACACCTCAGTGGAAACTATCTCTCTGGAGAAATTCCTGCTTCACTCGCCACGCTGAACAATCTGAAGAGACTCGACATCTCAAGTAACCAGTTTGTTGGATCTTTGCCAAACTTGCCCCAAATCTCAGGGCTGAACATGTTCCTTGCACAGAACAATCGCCTCACTGGAGCCATACCGTCCTTCGATTTCTCCAATTTTGACAAATTTAACGTCTCCTTTAACGATTTCAGCGGCCGCATTCCGAACGTGCATGGCTATTTCTCTGCTGACAGCTTCCTTGGCAATCCTGGACTGTGTGGAGATCCGCTGCTGAAGAATTGTTCCGGCCAGCACGTGTTGTATCTTAGCGCGGAGGCTCAGGAACAGGAAGAATCAAATTCAAATTCAAATTCAAACTCAAACTCAAACTCAAACTCAAAGGGTCCTTCTACGCAGCAGATTCTTATGTACTCTGGCTATGCTGCATTGGGTGTTATCATAGTCCTTTTTGTAGTCTTGAAGTTGTGTAGAAGAAAAAAGGGTGAGAATAAAATTGAAGCATTGAACAATGGTGTTCAAAAGCACAGCAATAATGTTTCAAGTGAATACAACAAAGGTGAGTTAAGCAAATCTGAGTTTTCAGTCACTTCTCACGAAAGTGGGATGGTTTCACAATCACTCATAGTTCTTTCAAGGCCGGCGGTGGCAGCGGGGATGGTTGAATTGAAATTGGAAGACTTGTTGGGTGCTCCTGCGGAGTTGATTGGGAGAGGAAAGAATGGAAGTCTTTATAAGGTGATGCTGGACAATGGGATAATGGTGGTTGTGAAAAGGATCAAGGATTGGGCCATTTCGAGCCACGATTTCAAGCAGAGGATGCGAGTTCTGAGTCAAGCAAAGCACCCTAATGTTCTGTCACCTCTTGCTTTCTATTGCTCCAAACAAGAGAAGCTTTTGGTGTATGAATATCAGCAGAATGGAAGTTTGTTCAAGCTTCTACATGGTACTCCAAAAACCTTTGACTGGACCAGCAGACTTACAATAGCATCCACAATTGCTGAGGCATTAGCTTTCTTGCACCAAGAGCTAGGAAACCACAATGGCATCATCCATGGAAACCTAAAATCCTCAAACATTCTGCTAAACAAGAACATGGAGCCATGCATAAGTGAGTATGGTGTAATGGGCATGGATGATCAAATTCAAAGTGGTTCACCTCTTGCCACCACCACCACAAGTTCCATTGATAAGGAAGATGTTTATGGCTTTGGTGTGATTCTTCTTGAACTTCTCACAGGCAAGTTGGTGAAGGGAAATGGAATTGACTTGGCTGATTGGGTTCAGTCAGTTGTGAGGGAAGAGTGGACAGGTGAAGTGTTTGACAAGTCACTGATTTCAGAGTATGCAAGTGAGGAGAGGATGGTCAATTTACTTCAGGTGGCTATAAGATGTATTAATGGTTCACCCGAGGCTAGGCCTAGCATGAACCAATGTGCTCAAGTGAAAATAGCTATCGAAAATGAATTGAGTTGCTCATCCACAAATGGATGTTGGTACAATATATACCATCTCCAGGTAGCTCAGTCTCGAGACTACCTTAGCTAA 1983 0.4337 MERISIWVVFVITTLFLLNTTNCVEEEVKITLIQFLAQVSGNNNSGQHNSTLSWKQDSDPCKDQWQGVYCDPQNISIKRLLLERLNFSGTLNVAMLCNLQPLAASLTFLSLDGNKISGVIESKIGNCKQLTRLHLSGNYLSGEIPASLATLNNLKRLDISSNQFVGSLPNLPQISGLNMFLAQNNRLTGAIPSFDFSNFDKFNVSFNDFSGRIPNVHGYFSADSFLGNPGLCGDPLLKNCSGQHVLYLSAEAQEQEESNSNSNSNSNSNSNSKGPSTQQILMYSGYAALGVIIVLFVVLKLCRRKKGENKIEALNNGVQKHSNNVSSEYNKGELSKSEFSVTSHESGMVSQSLIVLSRPAVAAGMVELKLEDLLGAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWAISSHDFKQRMRVLSQAKHPNVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTPKTFDWTSRLTIASTIAEALAFLHQELGNHNGIIHGNLKSSNILLNKNMEPCISEYGVMGMDDQIQSGSPLATTTTSSIDKEDVYGFGVILLELLTGKLVKGNGIDLADWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCINGSPEARPSMNQCAQVKIAIENELSCSSTNGCWYNIYHLQVAQSRDYLS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1462 660 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Aed9g1462 660 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Aed9g1462 660 Gene3D Ribonuclease Inhibitor 27 198 IPR032675 -
Aed9g1462 660 Gene3D Phosphorylase Kinase; domain 1 354 449 - -
Aed9g1462 660 Pfam Protein tyrosine and serine/threonine kinase 379 626 IPR001245 GO:0004672|GO:0006468
Aed9g1462 660 Gene3D Transferase(Phosphotransferase) domain 1 451 642 - -
Aed9g1462 660 Gene3D Ribonuclease Inhibitor 199 243 IPR032675 -
Aed9g1462 660 ProSiteProfiles Protein kinase domain profile. 375 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1462 660 MobiDBLite consensus disorder prediction 252 275 - -
Aed9g1462 660 SUPERFAMILY Protein kinase-like (PK-like) 379 627 IPR011009 -
Aed9g1462 660 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Aed9g1462 660 PANTHER OS05G0588300 PROTEIN 1 634 - -
Aed9g1462 660 PANTHER OS10G0387400 PROTEIN 1 634 - -
Aed9g1462 660 SUPERFAMILY L domain-like 40 219 - -
Aed9g1462 660 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1462 Aed-Chr9 16940605 16948742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1462 53 627 Receptor kinase-like Gene Family AT1G68400 34.926 1.04e-90 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed9g1462 PK_Tyr_Ser-Thr 3.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1462 - - gmx:100813796 907.516