Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1451 ATGAAGTCCAAAAACATCTCCACAAAAAACTACAACAACAACAACAACAACTCATCATGGTCATGGGTTCTCTTCTCCACACTGATGCTCATGCTTCCCCTCGCACTCTCCGATCCTCGGATCGGCGAGGCGGGGCTGTACTGCGGCAGCACGAAGGCCCCTATGAAGGCGGATTACATCCCGAGCTTCGTCAAGGAGATGGACAGCCTCTCGCAGTCGGTGACCAGCCACGGCTGGGGGACCCACTCTGTGGTAGCCAATCTGAAGGTTCCCATCTACGGCCTGGCGCAGTGCTTCGGCGACCTCTCCCACACGGACTGCCTGCTCTGCTACGCGGCGAGCCGCACCCGCCTCCCGCGCTGCCTCCCTTCGGTCTCGGCGCGCGTGTACCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGCTTCTATTCGGAACGCACCGATGCTCTGCGGGACAAGGTGAAGTGCAGTGATGGTGGTGATGGGAACGAGAGGGTAGAGTTGGAGATTGTGGAGAGAGTGGTGGAGAGTGTGGTTGAGATGGCTAGTACTGTGGGAAATGGTGGGTTTGGTGTGGGAGAGGTTGAGGGGGTTTATGCTTTGGCGCAGTGCTGGAACAGTGTTGGGAATCGTGGGTGCAGAGAGTGCTTGAGGAAAGCTGTGAGGGAGGTGAAGGGGTGCTTGCCCAATAAGGAAGGGAGGGCCTTGAATGCTGGCTGTTATTTGAGAAGTGTTTTTAGAGAAACTTCTCATACTCGAAGGTTCTTAAGAAGAAAAGGAGTCATAGTAGCAGAAGTGTTAGCAGCAGCTGCAGTTTTAATGCTTGCTGTCTCTGCCTCTTATTTAGTCTTCACAAAATTGTCAAAGAAAAATAAAGTAGCAGACTCTGTTACACATAAGCCTAGTCCTTTAAGCAGAGGTTACATGGCTCCTGAGTACCTAATTCGAGGACAGCTTACAGATAAAGCTGATGTATATAGTTTTGGAGTACTTGTTCTGGAGATTGTTTGGAAACTATACCGATCAAGCACACTAACTGAAGCTGTTGATCCTTGCTTGGGAGATGATGATTTTCCTGCAACTGAAGAAGCATCAAGGGTGTTTCGGATTGGATTGCTTTGCACACAAGCTTCTGCCTCCCTAAGGCCTTCCATGTCCCAAGTTGTTTACATGCTAAGTAATTCAAATGTGGATGTTCCCACACCAAATCAACCCCCATTTTTGAACACCGGAATGCTAGACTCAGATAGTTCCATTATTAAGTCTTATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTGTCCTACAGCTACTCCGAGTCCTCTAGTTCACGCAATTCAGATGAGCCATCAAGAAGTGAAGAATCATCAATTGTCCAAGTTTGA 1401 0.4946 MKSKNISTKNYNNNNNNSSWSWVLFSTLMLMLPLALSDPRIGEAGLYCGSTKAPMKADYIPSFVKEMDSLSQSVTSHGWGTHSVVANLKVPIYGLAQCFGDLSHTDCLLCYAASRTRLPRCLPSVSARVYLDGCFLRYDNYSFYSERTDALRDKVKCSDGGDGNERVELEIVERVVESVVEMASTVGNGGFGVGEVEGVYALAQCWNSVGNRGCRECLRKAVREVKGCLPNKEGRALNAGCYLRSVFRETSHTRRFLRRKGVIVAEVLAAAAVLMLAVSASYLVFTKLSKKNKVADSVTHKPSPLSRGYMAPEYLIRGQLTDKADVYSFGVLVLEIVWKLYRSSTLTEAVDPCLGDDDFPATEEASRVFRIGLLCTQASASLRPSMSQVVYMLSNSNVDVPTPNQPPFLNTGMLDSDSSIIKSYSTNSFISNALKKIGVSYSYSESSSSRNSDEPSRSEESSIVQV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1451 466 ProSiteProfiles Gnk2-homologous domain profile. 41 143 IPR002902 -
Aed9g1451 466 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 297 - -
Aed9g1451 466 Gene3D Transferase(Phosphotransferase) domain 1 281 402 - -
Aed9g1451 466 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Aed9g1451 466 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 29 297 - -
Aed9g1451 466 SUPERFAMILY Protein kinase-like (PK-like) 300 408 IPR011009 -
Aed9g1451 466 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 308 459 - -
Aed9g1451 466 MobiDBLite consensus disorder prediction 444 466 - -
Aed9g1451 466 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 308 459 - -
Aed9g1451 466 Pfam Salt stress response/antifungal 191 244 IPR002902 -
Aed9g1451 466 Pfam Salt stress response/antifungal 62 141 IPR002902 -
Aed9g1451 466 Pfam Protein tyrosine and serine/threonine kinase 287 392 IPR001245 GO:0004672|GO:0006468
Aed9g1451 466 Gene3D - 164 247 IPR038408 -
Aed9g1451 466 Gene3D - 45 143 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1451 Aed-Chr9 16715222 16719820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1451 19 293 Receptor kinase-like Gene Family AT5G40380 43.662 9.06e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aed9g1451 PK_Tyr_Ser-Thr 6.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1451 - - gmx:100790404 346.665