Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1441 ATGGCTGCTGCAATACCAATACCTTCTCACATGAAAGCATGGACATACTCAGAGTATGGAAAATCGAAGGAAGTTCTAAAGTTGAACCAGAGTGTGGCTTTGCCTGAGGTGAAGGAGGATCAGGTCCTCATCAAGGTCGCTGCTGCTTCCCTTAACCCCATTGATTACAAGAGAATGGAAGGCCTTTTCAAGAACAGCGATTCCCCTTTACCTACTGCTCCGGGATATGATGTTGCTGGAGTGGTGGTTAAAGTGGGAAATGAAGTGAAGAAATTTAAGGTTGGTGATGAAGTTTATGGTGATATCAATTTGACAGCTTTGGAATTTCCAAAGGTGATTGGTTCTTTGGCTGAGTACACTACTGCAGAAGAGAGACTATTGGCTCACAAGCCACAGAGTCTGAGCTTTGCTGAGGCTGCTAGCCTTCCTTTAACACTTGAGACTGCTTATGAAGGCCTTGAACGAACTGGCTTTTCTGCTGGGAAATCTATCCTTGTGCTTGGAGGTGCTGGACAAACTGAACAGGCATTCAAGGCTTTGAAAGAAGGAGGCAAAGTTGTGACAATAGTACCACCTGGATTTCCTCCAGCAATCCTTTTCATACTCTCTACTGATGGGGCAATCTTAGAGAAACTAAACCCCTATTTTGAGAGTGGTAAGCTGAAGCCGATACTTGACCCTAAGAGCCCGTTTCCGTTTTCTCAGACTGTCGAGGCATTTGCGCATCTGGAAACAAACAGAGCAACCGGGAAAATAGTCGTCTTTCCCATTCCGTGA 777 0.453 MAAAIPIPSHMKAWTYSEYGKSKEVLKLNQSVALPEVKEDQVLIKVAAASLNPIDYKRMEGLFKNSDSPLPTAPGYDVAGVVVKVGNEVKKFKVGDEVYGDINLTALEFPKVIGSLAEYTTAEERLLAHKPQSLSFAEAASLPLTLETAYEGLERTGFSAGKSILVLGGAGQTEQAFKALKEGGKVVTIVPPGFPPAILFILSTDGAILEKLNPYFESGKLKPILDPKSPFPFSQTVEAFAHLETNRATGKIVVFPIP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1441 258 CDD MDR_like_2 11 254 - -
Aed9g1441 258 Pfam Zinc-binding dehydrogenase 170 254 - -
Aed9g1441 258 Gene3D - 1 187 - -
Aed9g1441 258 Gene3D - 188 257 - -
Aed9g1441 258 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 172 IPR044626 GO:0016628
Aed9g1441 258 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 171 258 IPR044626 GO:0016628
Aed9g1441 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 253 IPR036291 -
Aed9g1441 258 SUPERFAMILY GroES-like 8 168 IPR011032 -
Aed9g1441 258 SMART PKS_ER_names_mod 21 254 IPR020843 GO:0016491
Aed9g1441 258 Pfam Alcohol dehydrogenase GroES-like domain 40 104 IPR013154 -
Aed9g1441 258 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 3 172 - -
Aed9g1441 258 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 171 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1441 Aed-Chr9 16458538 16463378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1441 64 98 Monolignol Biosynthesis Gene Families AT1G72680 51.429 8.33e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1441 K18980 - gmx:100817947 409.453