Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1431 TGGAGATGTATAACAAAACATGGCTTTTTTTTTGGCAATAGGAATAAGTGTGCAGCATGCTTTCGACAGTTCAACAAACTGGAGCACCTTGTGGAGCACATGAAGATCTCATACCATTCAGTTCATGAACCAACCTGTGGCATTTGCAGGAAACATTGCAGGTCATTTGAGTCTCTGAGGGAACATCTTATAGGTCCATTGCCAAAACAGGAATGCAGAGATATATTTTCCTATAGAGGGTGCAAGTTTTGTTTGAAGGTGCTTGATAGCCCTAACTCTCGCAGGATCCACCAAGAGAAATGCCAACTCTCTGGAAACGTCGGAATATTAATTGGTCGCTTTTCAAATTTGGGACTTCGTGATAATTTGGGTATTGGTGGTGGAGCAAGAGGACCACAAATAGTTGCTCTAGCATGTAAAATGGTTGGAGGTGGCAGTGATGGCTCACTGGATCTCTGTGCAAGAGTGTGCCTAACCGATGAGCATGATAACATAATATTCCATTCTTATGTGAAACCACCAATTCCAGTCACAAACTACAGGTATGAGACGACAGGCATCAGACCAGAATACCTGAGGGATGCAATGCCAATGAGAAATGTTCAGAGGAGGATTCAAGACTTCCTTTGCAATGGTGAGCCTATGTGGACAATTCGGGCAAAAGGTGGAAGAGCCAGGACTCTTGTTGGTCATGGTTTGGATCATGACCTTGAAAGTTTGCAAATAGAATATCGACCAGAAAAAATAAGTTCCTCTAGCTCTAAATCAACAATAAAGATAGATGGACACTGCAAAATACCCTCCACTGATGAAAACAAGCAAGCTGAGCAACTCACTCAAGTACCTAACACAGGCATATCTTGGGCAAGTATCTTTCACATTTTTCCTTTTATTGTAAAACAGTATTATATATGTAATTGGATTAATTAG 930 0.4118 WRCITKHGFFFGNRNKCAACFRQFNKLEHLVEHMKISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFSYRGCKFCLKVLDSPNSRRIHQEKCQLSGNVGILIGRFSNLGLRDNLGIGGGARGPQIVALACKMVGGGSDGSLDLCARVCLTDEHDNIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPMRNVQRRIQDFLCNGEPMWTIRAKGGRARTLVGHGLDHDLESLQIEYRPEKISSSSSKSTIKIDGHCKIPSTDENKQAEQLTQVPNTGISWASIFHIFPFIVKQYYICNWIN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1431 309 Pfam Exonuclease 150 244 IPR013520 -
Aed9g1431 309 SUPERFAMILY Ribonuclease H-like 147 247 IPR012337 -
Aed9g1431 309 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Aed9g1431 309 MobiDBLite consensus disorder prediction 253 276 - -
Aed9g1431 309 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 13 249 - -
Aed9g1431 309 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Aed9g1431 309 Gene3D - 131 270 IPR036397 GO:0003676
Aed9g1431 309 PANTHER OS02G0709000 PROTEIN 13 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1431 Aed-Chr9 16269903 16272085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1431 14 253 C2H2 Transcription Factor Family AT3G27970 72.614 2.48e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1431 - - gmx:100813973 464.536