Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1429 ATGGCATCAAGTTCAATGTCAGCCACAGGATCATGGAGTGCTGTGGACAACAAGGCCTTTGAAAGGGCTTTAGCTGTTTATGACAAGGACACTCCCGAGCGTTGGAACAACGTTGCCCATGCTGTTGGCGGGAAAACTCCTGAGGAAGTGAAGAGCCACTATGAGCTCCTCCTCAGAGACATTGGCCTAATTGAATCAGGCCAAGTGCCATTCCCAAATTACAAGAAAATCAGTGCAAAGAGAAGTGTCATCCGATTATTTTTTGGATGGGCTGGGCCGAGGAGGTGTGGACACATGGTAGTGCCCTCTGTCAGTTTGTGTGGGTTAATTGCCGATGTACGATCGTTTGAAATCAAGTTGAGGTGGGTGCAGTTTGTCTTTGTGCTTTTAGGCCTCGTGGACCTTCCTAGAGTCCCCCTGCTAAGCTCTTTATGTGGAATTTAG 444 0.482 MASSSMSATGSWSAVDNKAFERALAVYDKDTPERWNNVAHAVGGKTPEEVKSHYELLLRDIGLIESGQVPFPNYKKISAKRSVIRLFFGWAGPRRCGHMVVPSVSLCGLIADVRSFEIKLRWVQFVFVLLGLVDLPRVPLLSSLCGI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1429 147 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Aed9g1429 147 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Aed9g1429 147 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Aed9g1429 147 CDD SANT 11 58 IPR001005 -
Aed9g1429 147 Gene3D - 2 71 - -
Aed9g1429 147 SMART sant 8 60 IPR001005 -
Aed9g1429 147 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Aed9g1429 147 SUPERFAMILY Homeodomain-like 11 64 IPR009057 -
Aed9g1429 147 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1429 Aed-Chr9 16229622 16232443 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g1429 Myb_DNA-binding 8.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1429 - - gmx:100777923 135.576