Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1424 ATGCTTCCACTTCAATTCAGCACCACCCTCCCTCACCACCACCCTCCATCGCTGTTTCTCAGCAGCTCCTCCTCTCGCCTCCTGTACCACAACATCAGAAACAACAACAACAACAACCTCCACCTCGTTCGCTCCAACAACGTTATTGGAGCGAACAACAACCTTAGGGTTTTCGCAGCAGCGTCTGGTAACTCCGCATTCAAGATGAACCTCAACGAGTACCTCGTCACTCTCGAGAAGCCCCTCGGCATCCGATTCGCTCTCACCGTTGACGGCAGAATTATAGTCCACTCTCTCACCAAAGGGGGTAATGCGGAGCGGTCCAGGATAGTTATGGTGGGCGACACTTTGAAGAAAGCTGGCGATTCCTCTCAGAACACGCCTCTTTTTGAGATTAAAGACGTTGGAGATACACAGAAGGTGCTAAATGAGCAAACAAGTTCTTTTAGTTTGGTTCTTGAGAGGCCAACATCTCCCTTTCCCATTCAACTATTGCACAAGACGAGTGATCTTGAAATAGTGTTTAATAGAGGTCGAGTTCCTATTGCCACATGGAACAAGACTCTATTGGCATCAAATTTACAATCATCTAGTGAGAACTGCGGGAATGCAGGATTTTTGATGTTCAACTCAAAATTTCTTAAACCAAATGGAAGCAAGTTATTAGGCAATCAAAATCAACATACCATCACCCATGGTGAGAGAAACTTTGTGAATGAACACACAACACAACTTGCTTGTGTTTTTACTGAAGAAGTGTGTGGAGATGGAGATTGGGCTCATGGAAGTTTTCCACTTGAGGAATATATTCAGGCTCTGGATCGTTCCAAGGATGAGATGTACTATAATCACTCTCTTGGTATGCGCTATAGTAAGGGAGTTACTGCTGTTCTGAACTTTCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGCAAAATCAATCAATGAATCTTGTCAAAGGAATAATATTCTCATGATCAACTATCCTATTCGGGAGGGAGATTCTTATGATATGAGGAAAAAACTCCCATTTTGTGTGGGGCTTTTATTACGGTTGCTAAGGAAGAATCATCGTGTTTTTGTTACTTGCACTTCTGGATTTAATCAGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGATGTTTCCCTTCATGCAGCATATACTTGGGTTACTGGGATGCACACATGCAGGCCTGACAGGCCTGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAATGGCAGACATGATGGACCTCCTACACATGCTGTCATGTTTGTGTGGAATGGTCATGAGGTAAGAAGCCGGTCAGTTATAGCTCCATTGCCATTTTGTGGCTAA 1365 0.4381 MLPLQFSTTLPHHHPPSLFLSSSSSRLLYHNIRNNNNNNLHLVRSNNVIGANNNLRVFAAASGNSAFKMNLNEYLVTLEKPLGIRFALTVDGRIIVHSLTKGGNAERSRIVMVGDTLKKAGDSSQNTPLFEIKDVGDTQKVLNEQTSSFSLVLERPTSPFPIQLLHKTSDLEIVFNRGRVPIATWNKTLLASNLQSSSENCGNAGFLMFNSKFLKPNGSKLLGNQNQHTITHGERNFVNEHTTQLACVFTEEVCGDGDWAHGSFPLEEYIQALDRSKDEMYYNHSLGMRYSKGVTAVLNFQSGTEAENWGINAKSINESCQRNNILMINYPIREGDSYDMRKKLPFCVGLLLRLLRKNHRVFVTCTSGFNQSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVENGRHDGPPTHAVMFVWNGHEVRSRSVIAPLPFCG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1424 454 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 45 443 IPR030066 GO:0005983
Aed9g1424 454 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 45 443 - -
Aed9g1424 454 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 284 398 IPR029021 -
Aed9g1424 454 Gene3D Protein tyrosine phosphatase superfamily 280 427 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1424 141 440 Protein tyrosine phosphatase (PTP) family AT3G01510 61.300 2.18e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1424 - - gmx:100814503 743.806