Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1413 ATGTTAATCAGGTGGTCCAAAATTGCGAAGCATCTACCCGGAAGAACCGATAATGAGATCAAGAACTATTGGAGGACAAGGATCCAGAAACACCTCAAGCAAACTGAGAACTTCCAACAACAGCAACAACAGAGTAATGATAATTCTGATCAGATCAATAATCACCATCATCACAACCAACCTTGCAGTTCTAGCCAAGTTTTTACCACCATGGCTCACCCCAATATCGAAACCTATTCTCATTCTCCACCCAGTTATGATCTAGGAATGTTACATATTAATCCATTCTCAACTCATCAATTCGCCACAAATAATCCTGATCATCATTCAAGTTGTTGTACCAATGACAACAACAACATCAACAGCAACAACAACTATTGGAGCATGGAGGATATCTGGTCAATGCAATTAGATTAG 417 0.3933 MLIRWSKIAKHLPGRTDNEIKNYWRTRIQKHLKQTENFQQQQQQSNDNSDQINNHHHHNQPCSSSQVFTTMAHPNIETYSHSPPSYDLGMLHINPFSTHQFATNNPDHHSSCCTNDNNNINSNNNYWSMEDIWSMQLD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1413 138 MobiDBLite consensus disorder prediction 34 65 - -
Aed9g1413 138 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 4 137 - -
Aed9g1413 138 CDD SANT 3 26 IPR001005 -
Aed9g1413 138 ProSiteProfiles Myb-like domain profile. 4 28 IPR001005 -
Aed9g1413 138 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 137 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed9g1413 138 Gene3D - 3 61 - -
Aed9g1413 138 Pfam Myb-like DNA-binding domain 4 26 IPR001005 -
Aed9g1413 138 SUPERFAMILY Homeodomain-like 4 35 IPR009057 -
Aed9g1413 138 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1413 Aed-Chr9 15574623 15575396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1413 4 134 MYB Transcription Factor Family AT3G27810 41.045 2.65e-23 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g1413 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1413 K09422 - gmx:778046 133.265