Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1411 ATGGACAAGAGAATATGTGTCACGTCTCATGATCCTGAAGTGAGAAAGGGGCCATGGACAATGGAAGAAGACTTAATCTTGATCAATTATATTGCTAATCATGGTGAAGGTGTTTGGAACTTTTTGGCCAAAGCTGCTGGTAAACATAACTTCCGTTCTTCAAGTCTTAAACGTACCGGAAAGAGTTGCCGGCTCCAGTGGTTAAACTACCTCCGTCCGGATGTTAGAAGAGGGAAACAGCTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAACAGGTGA 282 0.4362 MDKRICVTSHDPEVRKGPWTMEEDLILINYIANHGEGVWNFLAKAAGKHNFRSSSLKRTGKSCRLQWLNYLRPDVRRGKQLLIMELHAKWGNR 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1411 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 75 IPR017930 -
Aed9g1411 93 ProSiteProfiles Myb-like domain profile. 11 71 IPR001005 -
Aed9g1411 93 Pfam Myb-like DNA-binding domain 16 71 IPR001005 -
Aed9g1411 93 SMART sant 15 73 IPR001005 -
Aed9g1411 93 Gene3D - 16 76 - -
Aed9g1411 93 SUPERFAMILY Homeodomain-like 13 93 IPR009057 -
Aed9g1411 93 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 93 - -
Aed9g1411 93 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 93 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed9g1411 93 CDD SANT 18 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1411 Aed-Chr9 15568890 15569246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1411 4 93 MYB Transcription Factor Family AT3G01530 64.286 8.75e-37 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g1411 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1411 K09422 - gmx:778047 153.295