Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1402 ATGTCACAAGAGAACAACAACACCACCAACTTATACATGTACCAACAAAATAATTTCAACAACCATTTTCATCATGAGAACTATCCTCTGATTGGTAATGAGTCAACCTTTAACCATGCTGATAGCCACAACCACCACCACCACCCATCTGCAGCTAATTTTTTCACTCATCAGGGTTCTAGTCCCTCCTCCACCCTCACCCCATTGTTCTCTTTGTCCCCTTCTTCAGGTGATTCATCATCTTCCTACAAACCCATGATCACATACCCCAATGAGTCCCTGAGAGGAAGCTTTGCCACCAACAACAACAACTACTACAACCCCATCATGCCTTATGCAGCAAACAACACCACCCTTGATGAACCCATGCATGGCCAGCCCAACAGTACCATTTGGGACTTTTCCCAGAAAACTCCCATTCTCTCTGGTGCAGGGCATGCAAGTGCAAGTGCAAATGCAATTGCACTACCTCAGCAGGTGGGCCCCACTCTGATCCTCGTCCAATTGGTTAGGCGCTTCGAGCTGAAAAAATGGTCTCACATCGCAAAGGTGCTGAGAGGAAGGGTTGGGAAACAGTGCAGGGAGCGATGGCACAACCATCTCCGTCCTAACATTAGGAAGGAGTCATGGAACGAAGAGGAGGACAAAATTTTGATTGAAGCTCACAAAGAGGTTGGGAACAAATGGCCGGAGATCGCAATGAGAATGCTTGGGAGGACTGAAAACACAATCAAGAACCATTGGAACACGACAAAGCATCACCAGAACACGAAGCAGTTGAGGAACCAGCGCCAGAACTCGAAGGGCTATCCCACACTTCTCAAGAGCTACATAAAGCAAGTCACCACGGAAGAAGAGGCGGCCGAAAAAAAGGTGGAGCTGCTGCTGCTGAAGAATTCCATGAGCAACATGACCCTCAAGGGAGGCGAGAGTAGTGGCAATTCGGGTTGCCCCTATCAAGATAGCTCCAAGGGTGGTTTCAGTTTCGAGGAGGATGGTGAGATGCAACATGCTGGAGGCAACAATAACAATGGCAGAGGATATGTGTTTGTGATAGTGAATAATAGTGGTGCTGATGTGGAAGGTGATGATGGCGCAATGGGTTATGATATTTCCATGCAGATGGAAAATTCAAATATCATATTATTTTCTAGTTCTTCGTTAGACTTACTTTTTACACAAATTTGA 1188 0.463 MSQENNNTTNLYMYQQNNFNNHFHHENYPLIGNESTFNHADSHNHHHHPSAANFFTHQGSSPSSTLTPLFSLSPSSGDSSSSYKPMITYPNESLRGSFATNNNNYYNPIMPYAANNTTLDEPMHGQPNSTIWDFSQKTPILSGAGHASASANAIALPQQVGPTLILVQLVRRFELKKWSHIAKVLRGRVGKQCRERWHNHLRPNIRKESWNEEEDKILIEAHKEVGNKWPEIAMRMLGRTENTIKNHWNTTKHHQNTKQLRNQRQNSKGYPTLLKSYIKQVTTEEEAAEKKVELLLLKNSMSNMTLKGGESSGNSGCPYQDSSKGGFSFEEDGEMQHAGGNNNNGRGYVFVIVNNSGADVEGDDGAMGYDISMQMENSNIILFSSSSLDLLFTQI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1402 395 ProSiteProfiles Myb-like domain profile. 202 252 IPR001005 -
Aed9g1402 395 Coils Coil 278 298 - -
Aed9g1402 395 PANTHER TRANSCRIPTION FACTOR MYB98 165 277 - -
Aed9g1402 395 MobiDBLite consensus disorder prediction 65 84 - -
Aed9g1402 395 SUPERFAMILY Homeodomain-like 181 259 IPR009057 -
Aed9g1402 395 Gene3D - 163 206 - -
Aed9g1402 395 MobiDBLite consensus disorder prediction 34 59 - -
Aed9g1402 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 201 IPR017930 -
Aed9g1402 395 PANTHER MYB PROTEIN-RELATED 165 277 - -
Aed9g1402 395 Pfam Myb-like DNA-binding domain 165 216 - -
Aed9g1402 395 ProSiteProfiles Myb-like domain profile. 166 201 IPR001005 -
Aed9g1402 395 SMART sant 206 254 IPR001005 -
Aed9g1402 395 SMART sant 159 203 IPR001005 -
Aed9g1402 395 CDD SANT 165 201 IPR001005 -
Aed9g1402 395 CDD SANT 209 252 IPR001005 -
Aed9g1402 395 Gene3D - 208 260 - -
Aed9g1402 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 256 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1402 Aed-Chr9 15408400 15410644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1402 42 281 MYB Transcription Factor Family AT4G18770 38.710 4.49e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed9g1402 Myb_DNA-bind_6 2.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1402 K09422 - gmx:100793032 314.309