Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1400 ATGGAGTTTGATCCAATCTTCCAAGAGAAAATGCAGTACCTTTCTGTAGGGGTTTTCCCCGAGATCAAAGCTAAGAACCCACCCATGTCACAAGAGAACAACAACACCATCAACTTCTACATGTACCAACAAACCCATTTCAACAACCATTTTCATCATGAGAACTATCCTCTGATTAGTAATGAGTCAAACTTTAACCATGCTGATAGCCACAACCACCACCACCACCACCCAGCTGCAACTAATTTTTTCACTGATCAGGGTTCTAGTCCCTCCTCCATCCTCACCACATTATTCTCTTTGTCCCCTTCTTCAGGTGATTCATCATCTTCCTACAAACCCATGATCACATACCCCAATGAGTCCTTGAGAGGAAGCTTTGCCACCAACAACAACTACTACAACCCCATCATGCCTTATGCGACAAATAGCACCACCCTTGATGAACCCATGCATGGCCAACCCAACGGTACCATTTGGGACTTTTCCCAGAAAACTCCCATTCTCTCTGGTGCAGGGCATGCAAGTGCAAGTGCAAGTGCAATTGCACAGCCTCAGCAGGTGCAGAGGAAGAGTACTGCCAGAATTCAGCAGAAGAATATGGCCAACATAATCAAAGGCCAGTGGAGTCCTGATGAGGACAGGATCCTCGTCCAATTGGTGAGGCGCTTCGGGCTGAAAAAATGGTCCCACATCGCGAAGGTGCTGAGAGGAAGGGTTGGGAAACAGTGCAGGGAGCGATGGCACAACCATCTCCGTCCTAACATTAGGAAGGAGTCATGGAGCGAAGAGGAGGACAAAATTCTGATCGAAGCCCACAAACAGGTTGGGAACAAATGGGCGGAGATCGCAAGGAGACTGCTTGGGAGGACTGAAAACACAATCAAGAACCACTGGAACGCGACAAAGCGTCGCCAGAAGGCGAAGCTGCTGGGGAACAAGCGCCGAAGCTCAAGGGGCGAGCCCACACTTCTCGAGAGCTACATAAGGAAAGTCACCGCGAAAGAAGAGGCGACCGAGAAAATGGCGAAGCTGATACTAAAGAAATCCATGAGCAAAATGACCCTCAAGGGCGGCGAAAGTAGTGGCAATTCGGGTCACCCATATCGGGTTTGGTACGATAGCTCCGAGGGTGGCTTCACTTCTGAGGAGGATGGTGAGATGCAGCCTGCTGGTGACGACGAGGGCAACGACGGCGGAGGATATGTGCCTATGATGGTGAATAATAATGGTGCTGATGTGGAAGATGATGATGCAATGGATTATGATATTGCAATGGAGATGGCGCCCGAGGTTCAGATGAAGAAAGAAATGGATATCATGGAGATGATCTATAGAAAAGCTTAA 1347 0.487 MEFDPIFQEKMQYLSVGVFPEIKAKNPPMSQENNNTINFYMYQQTHFNNHFHHENYPLISNESNFNHADSHNHHHHHPAATNFFTDQGSSPSSILTTLFSLSPSSGDSSSSYKPMITYPNESLRGSFATNNNYYNPIMPYATNSTTLDEPMHGQPNGTIWDFSQKTPILSGAGHASASASAIAQPQQVQRKSTARIQQKNMANIIKGQWSPDEDRILVQLVRRFGLKKWSHIAKVLRGRVGKQCRERWHNHLRPNIRKESWSEEEDKILIEAHKQVGNKWAEIARRLLGRTENTIKNHWNATKRRQKAKLLGNKRRSSRGEPTLLESYIRKVTAKEEATEKMAKLILKKSMSKMTLKGGESSGNSGHPYRVWYDSSEGGFTSEEDGEMQPAGDDEGNDGGGYVPMMVNNNGADVEDDDAMDYDIAMEMAPEVQMKKEMDIMEMIYRKA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1400 448 Pfam Myb-like DNA-binding domain 209 266 - -
Aed9g1400 448 Gene3D - 205 257 - -
Aed9g1400 448 PANTHER MYB DOMAIN PROTEIN 100-RELATED 111 344 - -
Aed9g1400 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 256 IPR017930 -
Aed9g1400 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 307 IPR017930 -
Aed9g1400 448 ProSiteProfiles Myb-like domain profile. 253 303 IPR001005 -
Aed9g1400 448 CDD SANT 260 303 IPR001005 -
Aed9g1400 448 PANTHER MYB PROTEIN-RELATED 111 344 - -
Aed9g1400 448 SMART sant 205 254 IPR001005 -
Aed9g1400 448 SMART sant 257 305 IPR001005 -
Aed9g1400 448 ProSiteProfiles Myb-like domain profile. 201 252 IPR001005 -
Aed9g1400 448 MobiDBLite consensus disorder prediction 377 414 - -
Aed9g1400 448 SUPERFAMILY Homeodomain-like 203 299 IPR009057 -
Aed9g1400 448 MobiDBLite consensus disorder prediction 68 88 - -
Aed9g1400 448 CDD SANT 209 252 IPR001005 -
Aed9g1400 448 Gene3D - 259 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1400 Aed-Chr9 15293090 15295697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1400 202 332 MYB Transcription Factor Family AT4G18770 66.412 2.11e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed9g1400 Myb_DNA-bind_6 8.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1400 K09422 - gmx:100793032 468.003