Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1389 ATGATTAAACCGTTGCTTAAGGCGAGGGGAGAATCTGTGAAGATCATGGCCTCTTCTAGCTACTCTAACTCTCCCTGTGCTGCCTGCAAGTTTCTGAGAAGGAAATGCATGCCGGATTGCATATTCGCCCCATATTTCCCACCAGAAGAGCCTCAAAAGTTCTCCAATGTTCACAAGATATTCGGTGCAAGCAACGTGAGCAAGCTTCTGAACGAGGTACAACCCCACCAAAGAGAGGATGCAGTGAACTCTCTGGCCTATGAAGCCGAGGCAAGGATTAAAGATCCAGTTTATGGCTGTGTTGGGGCAATTTCAGTGCTCCAAAGACAAGTCATTAGGCTCCAAAAGGAACTCGATGCCACAAACGCTGATTTGATCCGCTATACCTGCAATGAAATTCCAACAACTCATCAAGATGGGATCAGAAGAATTGGTGAAGCGGGTGGTGCTTCTTCTCTTGCTCAACCTGATGAAGGGTTGGTGGTATAG 489 0.4703 MIKPLLKARGESVKIMASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFSNVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEIPTTHQDGIRRIGEAGGASSLAQPDEGLVV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1389 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 16 137 - -
Aed9g1389 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 137 - -
Aed9g1389 162 Coils Coil 104 124 - -
Aed9g1389 162 Pfam Lateral organ boundaries (LOB) domain 25 121 IPR004883 -
Aed9g1389 162 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1389 Aed-Chr9 14544302 14547150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1389 13 143 AS2 family AT3G27650 75.758 6.06e-71 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed9g1389 LOB 1.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1389 - - gmx:100306630 263.848