Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1373 ATGGAGAAAGAGGTTGTGGAAAACCTTTGGAATGGTAACACAGAAATGCAGATTGAAGCAGCTGTGGAACTTAGGAAACTCAGCAGAAAACAGAGGCACAACTTGGTGGAAAGTAGAGTTATGGTACCTCTAATTTCCATGCTTCATTATGACAACTATGAAGCCATTGAAGCTGCTCTGTGTGCTCTACTTAGCCTTGCCTTTGGAAGTGAAAGAAACAAGTCTCGGATCATCAAATCAGGAGCATTGCCAGTGTTGCTGAGTCTCTTCCATTGCCAAAGCCAAACAGTGATAGAACTAACAATAGCCACATTTCTAACCATCTCCTCTTGCAACTCAAACAAGGTAGCAATTGCTTCCTCTGGAGCCATCCAACTCTTAGCTGAATTTCTTAATAGCACAAGTAGCAGCACTACTCAATCCCAGCTTGACATATTAGCCACTCTCCACAACCTATCAACATGCCAAGAGATTATTACACCTTTCATTGTCTCTTCTGGGGTCATACTTTCATTGCTTGAACTCATCCACACATCAGAAAAAAAATCATCCACATTGGTTGAGAAAGCAATTGGGTTGCTAGAACACATTGTCACTTCATCAAAGAGTGCACTTTGTGAGGCTGCTAGTGTTGGAGGAGCAGTTAGGACATTGGTGGAGACTATTGAAGATGGGTCATTTCAAAGCAAAGAGCATGCAGTTGGGACACTCCTCCTTTTTTGCCAAAGCAGCAGAGAAAAATATAGAGGAATGATCCTGAGAGAGGGAGTGATGCCAGGGTTGCTTCAGTTAAGTGTGGATGGAACTTGGAGAGCCAAAAATTTGGCCAAGAAATTGTTGCTTCTTTTGAGAGATTGCGACAATTATAGTTCATCTAGTAAACAAGTTAATTATGAGGTTGTAGAACGGATCATGGAAGAAATTGATGATGCTGAAGGGTTAGGGGAGGAATTGGCAGAGACTACGTTGAGATTGGTAGAGGAAATGGTGGCAAAGCTTAGTACGTAG 1008 0.4216 MEKEVVENLWNGNTEMQIEAAVELRKLSRKQRHNLVESRVMVPLISMLHYDNYEAIEAALCALLSLAFGSERNKSRIIKSGALPVLLSLFHCQSQTVIELTIATFLTISSCNSNKVAIASSGAIQLLAEFLNSTSSSTTQSQLDILATLHNLSTCQEIITPFIVSSGVILSLLELIHTSEKKSSTLVEKAIGLLEHIVTSSKSALCEAASVGGAVRTLVETIEDGSFQSKEHAVGTLLLFCQSSREKYRGMILREGVMPGLLQLSVDGTWRAKNLAKKLLLLLRDCDNYSSSSKQVNYEVVERIMEEIDDAEGLGEELAETTLRLVEEMVAKLST 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1373 335 Gene3D - 208 314 IPR011989 -
Aed9g1373 335 PANTHER U BOX DOMAIN-CONTAINING 1 312 - -
Aed9g1373 335 SMART arm_5 155 199 IPR000225 GO:0005515
Aed9g1373 335 SMART arm_5 111 154 IPR000225 GO:0005515
Aed9g1373 335 SMART arm_5 70 110 IPR000225 GO:0005515
Aed9g1373 335 SMART arm_5 28 68 IPR000225 GO:0005515
Aed9g1373 335 Coils Coil 301 321 - -
Aed9g1373 335 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 312 - -
Aed9g1373 335 SUPERFAMILY ARM repeat 4 307 IPR016024 -
Aed9g1373 335 Gene3D - 3 207 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1373 Aed-Chr9 13457880 13459802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1373 3 285 U-box Gene Family AT2G23140 31.250 2.95e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1373 - - gmx:100811007 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1373 9 13457880 13459802 Aed9g1373 9 13457880 13459802 ECH