Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1365 ATGGCTGCTGCATGGAAGAAGTTAGCAACTTTAGGGAAGGGCTCTTTTGCAACCGTTTATCTTGCTACTCTTTCTCTTCCACAAGAACCGAATGAGAAGGTTGTAGCCGTGAAGAGTTCAAGTCATTTCTCTTTCTCAATTGTTTCAATGCAGAAAGAAAAAAAGAATTCTGAACTTGTTCATTGGTTGCAAAGAAATCCTTCAATAAACGATTTCACTTACAATCTTTTCATGGAGGTTGCACCCTATGGTTCTCTTAGTTATTTAATAAAGAAGAAGGGGTCACTGACGGAGAGTGAAGTGAGAGCCTACACTATCATGCTTCTCAAAGGGCTTTCTTGCATTCACCAAAAGGGAGTTGTTCATTGTGATCTTAAACCGGACAACATTCTTCTGTTTCCTAATTCATCTGAGGAGAAAGATGATCATGAAATCTTGTTTCAACTGAAAATTGCTGATTTTGGAATGTCCAAGACTAAAGAAGATCGTTTAAACGATGCTGACTATAAGAAGATCAAGTTTAGAGGGACACCTTATTACATGTCACCGGAATCGGTTGTTGGTGTGATCAAACTGGCATTGGATATATGGTCTCTTGGATACATTGTGATTGAGATGATGACTGGATTGCGGGCATGGAACCTGACAACGAAAACGAAAGAGGAGATAATGTACAAGCTTTTAGTTCTTGAAGAAGCACCAAAAATACCCAATGGACTGAACTGGGTTTGCAAGAATTTCTTGAGCAAGTGTTTTGTGAAGGATCCTAGTCAGAGATGGACTGCTACAATGCTTCTCAACCATCCTTTTCTCTGTAATGGATCTAACATGCAACAAAGTTCATCATCCTTTTTCTCATATGATATTTTTAATCATGTACGTGTACGTCACATTAACCAAACTAAGAAGGATGATGATAAACACAACCTACCTCAACATGGATTTGGACAACATCAAATAGAAAAGAGATTAGCATTTGAATTTTTGAAGAATTAG 996 0.3795 MAAAWKKLATLGKGSFATVYLATLSLPQEPNEKVVAVKSSSHFSFSIVSMQKEKKNSELVHWLQRNPSINDFTYNLFMEVAPYGSLSYLIKKKGSLTESEVRAYTIMLLKGLSCIHQKGVVHCDLKPDNILLFPNSSEEKDDHEILFQLKIADFGMSKTKEDRLNDADYKKIKFRGTPYYMSPESVVGVIKLALDIWSLGYIVIEMMTGLRAWNLTTKTKEEIMYKLLVLEEAPKIPNGLNWVCKNFLSKCFVKDPSQRWTATMLLNHPFLCNGSNMQQSSSSFFSYDIFNHVRVRHINQTKKDDDKHNLPQHGFGQHQIEKRLAFEFLKN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1365 331 SUPERFAMILY Protein kinase-like (PK-like) 5 283 IPR011009 -
Aed9g1365 331 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 295 - -
Aed9g1365 331 SMART serkin_6 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1365 331 ProSiteProfiles Protein kinase domain profile. 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1365 331 Pfam Protein kinase domain 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1365 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Aed9g1365 331 Gene3D Transferase(Phosphotransferase) domain 1 1 326 - -
Aed9g1365 331 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 295 - -
Aed9g1365 331 ProSitePatterns Protein kinases ATP-binding region signature. 11 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1365 Aed-Chr9 13130236 13133708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1365 5 271 MAP Kinase Kinase Kinase AT3G50310 38.849 2.66e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed9g1365 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1365 - - gmx:102664043 367.081