Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1362 ATGACTCTGCAATGTTCAGTTTTTTTCAATCTTCTTCTTCTTCTTATTTGTTTCACCAAAGAAGCTTTATGTTCAGTAAGTGATAATTACCTTAACCAGGAGATACTCGCGGAGCAAGAATCAGACAGAGTGCATGGATTACCAGGGCAGCCTCCGGTGAAGTTCAAACAATATGCTGGTTATATCACTGTCAATGAAACCCATGGCAGAGCACTGTTTTATTGGTTCTTCGAGGCAACTCACAAACCAGAACAAAAACCTGTTCTTTTATGGCTCAATGGAGGGCCTGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCACAATACAGTAGTCAACCAAAGATAAAGTTGAATCCTTATTCTTGGAATAACGCTGCGAATCTTTTGTTTTTGGAATCCCCGGTTGGAGTGGGATTCTCCTACACCAACACCAGCAGCGATATAAGTGAGCTTGGTGACACCATTACTGCTAAAGATTCACACACCTTTGTCATCAAGTGGTTTAGAAGATTTCCACAATTCAGATCACACAAATTCTACATTTCTGGTGAAAGCTATGCAGGGCACTATGTTCCCCAACTTTCTGAGCTCATTTTTGATAATAATCGCAATCCTTCCGAAAAAGACTACATTAACTTTAAAGGATTTTTGATTGGAAATGCATTATTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCAGTGATATCTGATGGAGTATACCATAACATTACAACCATATGCAATTTCAGCCTTCCAATTCTAAATCAAACAACTGAGTGCAATGTGGAACTCAACAAGTACTTCGCTGTCTATAAGATTATTGACATGTATAGCTTGTACACTCCCAGGTGTTTCAGCAACAGCAGCAGCACCAGAAAGGAAGCCCTTCAAAGTTTTTCAAAAATTGATGGGTGGCATAGAAAACCAGCTGGGTATGATCCTTGTGCATCCGATTATACTGAAGTGTACCTAAATAGGCCAGAAGTCCAAAAGGCATTGCATGCCAATCTCACCAAAATTCCTTATCCATGGACTCACTGCAGCGATAATATCACATTTTGGAATGACTCACCACAATCCATGCTTCCTGTCATCAAGAAGCTTGTTGCTGGTGGTATTCGCATTTGGGTTTACAGTGGAGATACTGATGGAAGAATTCCCGTGACTGCAACAAGATACACTCTTAAAAAGTTGGGGCTTGGAATTGTTGAAGATTGGACACCCTGGTATACAAGCAACCAGGTGGGAGGATGGAGTATTGTTTACGATGGACTTACTTTTGTTACCATAAGAGGTGCTGGCCATCAAGTTCCTACTTTCACACCCAAGCAAGCTCTGCAGTTGGTTCGACACTTCCTAGCAAATGAGAAATTACCATCTCAACCAATTTAA 1434 0.41 MTLQCSVFFNLLLLLICFTKEALCSVSDNYLNQEILAEQESDRVHGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHKPEQKPVLLWLNGGPGCSSIGYGEAEELGPFFPQYSSQPKIKLNPYSWNNAANLLFLESPVGVGFSYTNTSSDISELGDTITAKDSHTFVIKWFRRFPQFRSHKFYISGESYAGHYVPQLSELIFDNNRNPSEKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGVYHNITTICNFSLPILNQTTECNVELNKYFAVYKIIDMYSLYTPRCFSNSSSTRKEALQSFSKIDGWHRKPAGYDPCASDYTEVYLNRPEVQKALHANLTKIPYPWTHCSDNITFWNDSPQSMLPVIKKLVAGGIRIWVYSGDTDGRIPVTATRYTLKKLGLGIVEDWTPWYTSNQVGGWSIVYDGLTFVTIRGAGHQVPTFTPKQALQLVRHFLANEKLPSQPI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1362 477 Gene3D - 375 468 - -
Aed9g1362 477 Gene3D alpha/beta hydrolase 38 300 IPR029058 -
Aed9g1362 477 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Aed9g1362 477 PANTHER CARBOXYPEPTIDASE 12 476 - -
Aed9g1362 477 Gene3D - 329 366 - -
Aed9g1362 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 476 IPR001563 GO:0004185|GO:0006508
Aed9g1362 477 SUPERFAMILY alpha/beta-Hydrolases 39 472 IPR029058 -
Aed9g1362 477 ProSitePatterns Serine carboxypeptidases, histidine active site. 439 456 IPR033124 GO:0004185
Aed9g1362 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Aed9g1362 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Aed9g1362 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Aed9g1362 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Aed9g1362 477 Pfam Serine carboxypeptidase 48 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1362 Aed-Chr9 13013350 13021136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1362 337 472 Calmodulin-binding Proteins AT2G22960 29.197 1.78e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1362 K16297 - gmx:100797264 929.472