Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1352 ATGCATGTAGACAATAACCATTATCCTAGTATTGGATTGGAATTCGACACTCTTGTGGATGTTAGAAATTTCTACATAGCATTTGCTAAAGAACAAGGCTTTGGAATTCGCATTCGTTCTACTAAAGGAAATTTGTGCATACTTGTGTGGTGTAATGTTGGTCAGTATACAGGCAATGGTAGTAGTAATGAAGAAAGTGATATGATATCAGGAAAAGGTAAGAAAAGGTGCTCTACTTCGCAAACAGGTTGTAAGGCTTCACTCATTGTTTCAAAAGCACACCAGAGACTTAAATGGACCATCATCAATTTTAATAATTCTCATAATCATGTTATGATTAGTTCTAAAAGTGTGAACTACCTTAGGTGTCAAAGAACCTTCTTGCAAAAGTATGCAACATCTGTTTATACAAGAAACATTTTTAATAAGTTTCAAGATCAACTTGCAAAGGTCAGCCAATTCACAAAGGAAAAAATTGAGAAAATTGGGTCTCAACATACATATAAGGTATACAGGTTTGTATCTTCAGAGTTAGCGCAAGTCTATGAAAAAGCTAAAATGATAGATTCTGAAGAGCATACCAGTATAGACACATTTCTTTCAAAGGCAAGTCAAGATCTCCCTACATGTGAGCAAGTAAATGAAGAGCTTGAATTGCATATTAAAAATCCAATAATAGCACAAACCAAAGGAAGACAAAAGGATTCTATCAAGTTGTCTCAACTTGGAAGAATCATAAGTGGTCTAGAGTTGTTAATGAGTCAATTGCCAGCAAAAAGAAGAGCGTGCCAACAATGCGGAGATCATGGTCATAATCGACGAAGCTACAAGCAAAAAGTACTTGATGAAGACGTGGTGTCGGTGGGGATTAACATCAAATATTTGAGGTGCGTAGTCATGATATGGTGA 909 0.3586 MHVDNNHYPSIGLEFDTLVDVRNFYIAFAKEQGFGIRIRSTKGNLCILVWCNVGQYTGNGSSNEESDMISGKGKKRCSTSQTGCKASLIVSKAHQRLKWTIINFNNSHNHVMISSKSVNYLRCQRTFLQKYATSVYTRNIFNKFQDQLAKVSQFTKEKIEKIGSQHTYKVYRFVSSELAQVYEKAKMIDSEEHTSIDTFLSKASQDLPTCEQVNEELELHIKNPIIAQTKGRQKDSIKLSQLGRIISGLELLMSQLPAKRRACQQCGDHGHNRRSYKQKVLDEDVVSVGINIKYLRCVVMIW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1352 302 PANTHER FAR1 DNA BINDING DOMAIN, FHY3/FAR1 FAMILY-RELATED 5 132 - -
Aed9g1352 302 Pfam FAR1 DNA-binding domain 23 112 IPR004330 -
Aed9g1352 302 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1352 Aed-Chr9 12483863 12486734 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g1352 FAR1 1.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1352 - K17604 mtr:MTR_0853s0010 151.754