Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1343 ATGAAACAAGGTTTAGGAAAGACTCGGAGAAGGTGCAGGGTGGTCAACCTTGGAAGATATAGCCAACTTGAAAGGAGAACATTTTGGAAGAAAGGAGGGACGAATCCAATTAATAAATCACTTTTAACTGTTGACTACGATTGCTTGGGGATTCATGACCTAACACAAGACATGGGTAGAGAGATTGTTAAGGAGGAAGTAGGTAACAAAGTTGGTAAACGCAGCAGATTATGGCATCATGAAGATGTTCTTCAAGTACTAGTTGATAATAATAATGGAAGTAGTCAAATTCAAGGAATAATGTTTGATCCCCCTCAAAGAGAAGAAATTTATTGTATTAATACTGTATTTAAGAAGATGAAGAATCTTAGAATTTTCATTCTCCGTAACACTAGTTTTTCACATGAGCCTCGTTATCTTCCAAATAACTTAAGGCTACTTGATTGGAAGAACTGCCCTTCAAAGGCTTTCCTATCAGATTTTTATCCCAGAAAAATTGGGGCCTTTAATTTAAGTGGAAGTCCTCTGCTCGTATTGGAAAAATCATTTCAGAGATTTGACCATTTGACTTACATGAATATCTTTGGTTGTGATATGGTTACTGAATTTCCTTATGTGTCTTTAGTCATGAATTTAAGAGAATTGATACTTGATGGATGTGTGAATCTCATTAACATTCATGAATCAGTTGGATATCTCACTAACCTTGTGTTAAACCTCCAATTAAAAAGAGGAGGGCTCTTGAATCTCCTATCAGGTGTATCTTTCATTAAGCAATTGTATAAACGAGAGTTTCTATTACCTTGTTTCCCCCTAAGTGCTTCAGAATGCATGCAACTTGAAAGTTTTGTGGCAACAATGTATTTACCATCTCTCAAATACCTTTCCTTTAACTTTTGTAGAAGACTTAAATGCTTCCCAGAGATTAAGGGAACGATGGATAAGCCTTTAATGATTAATATGTTAAATACAACTATTAAGGAGTTTCCAGAATCCATTGAGAAACTTACTGGGCTTAACTATCTTGATATGACAAGTTGTGAGCAACTCATACATTTAACAAGAAGCACTTCAACATGTTTCAGATTAGAGACATTACATTTGGACAATGCTGCGATATCAGACCAAGATTTTCACACCATTCTTTACTATTTTCCTAACTTGAAAGACTTAAATATATCATGCAACAAATTAGTGTCTTTGCTCCCAACACGTATTATAGAATCTACTAACTTTGTAAGTCTTGACGTTAATTTTTGTTGTGAGCTTCAACAAATTCCAGAACTGCCATCAAGTGCCAGGCACTGCAAATCCTTAACTTTGGAGACAGAAAATATCTTATGGTCTCAGGGATGGTTTCCAGATTTCAAGGCTCGTGGGAAGTTCCCTACAATTGCTATAGCATTTGTGTTTGGGGAATTGAACGCCAATGCCAATGACAAGGCTAATAGACAGTTTCAACATACTAGTATAAATGTTGGCCTGCACTTGTTGACTGAGGATAAAAGCAAAAAGTTTCGTAATATCTCTGTCCCTAAGAATCGTGTGTTGTTGTATGACCTACAAGACTTGTTCAGTTTTGAGGAGTGGGAAGATTTAGGTGTTGGAGTTGGTAATGATCATTGGAAAACCATACAGGTTTACTGTGAAACAGAGTTGACTCTATGTTCATGGGGAGTTTATGTGTACAATGAGACTAACATGGAAGATATCTACTTCACAAGTCATGATCCAAATTCCCCTTCGAAAAGAAGCCAAGGGTTGCACCTGCGATTCTCGAAGAAAGCATTAGGGATGGTTAAGGCTCAAGATGGGAAAGGAACTTCAGGTTCCTACATTGATGAGGAGAAAAAGAGTCAAGAAGCCGCAGTTTTTCGTCTCAACAGCATGGCTCATGTTTCTACAGTATATCGGCCTGGCTGTCACAAGAACTCATCAGAATCAGTGATCACTGATCGCTGTCCAATGCAATATGTCACTAAAGTAAAGGAAAATTGA 1998 0.3719 MKQGLGKTRRRCRVVNLGRYSQLERRTFWKKGGTNPINKSLLTVDYDCLGIHDLTQDMGREIVKEEVGNKVGKRSRLWHHEDVLQVLVDNNNGSSQIQGIMFDPPQREEIYCINTVFKKMKNLRIFILRNTSFSHEPRYLPNNLRLLDWKNCPSKAFLSDFYPRKIGAFNLSGSPLLVLEKSFQRFDHLTYMNIFGCDMVTEFPYVSLVMNLRELILDGCVNLINIHESVGYLTNLVLNLQLKRGGLLNLLSGVSFIKQLYKREFLLPCFPLSASECMQLESFVATMYLPSLKYLSFNFCRRLKCFPEIKGTMDKPLMINMLNTTIKEFPESIEKLTGLNYLDMTSCEQLIHLTRSTSTCFRLETLHLDNAAISDQDFHTILYYFPNLKDLNISCNKLVSLLPTRIIESTNFVSLDVNFCCELQQIPELPSSARHCKSLTLETENILWSQGWFPDFKARGKFPTIAIAFVFGELNANANDKANRQFQHTSINVGLHLLTEDKSKKFRNISVPKNRVLLYDLQDLFSFEEWEDLGVGVGNDHWKTIQVYCETELTLCSWGVYVYNETNMEDIYFTSHDPNSPSKRSQGLHLRFSKKALGMVKAQDGKGTSGSYIDEEKKSQEAAVFRLNSMAHVSTVYRPGCHKNSSESVITDRCPMQYVTKVKEN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1343 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 457 561 IPR044974 GO:0006952
Aed9g1343 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 282 356 IPR044974 GO:0006952
Aed9g1343 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 247 IPR044974 GO:0006952
Aed9g1343 665 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 282 356 - -
Aed9g1343 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 370 457 IPR044974 GO:0006952
Aed9g1343 665 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 370 457 - -
Aed9g1343 665 Gene3D Ribonuclease Inhibitor 106 319 IPR032675 -
Aed9g1343 665 Gene3D Ribonuclease Inhibitor 320 454 IPR032675 -
Aed9g1343 665 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 457 561 - -
Aed9g1343 665 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 39 247 - -
Aed9g1343 665 SUPERFAMILY L domain-like 51 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1343 Aed-Chr9 12221017 12233663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1343 37 368 WRKY Transcription Factor Family AT4G12020 30.659 6.56e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1343 - - gsj:114401341 598.586