Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1336 ATGACTCATAAGGGATGCTCGAATCTTGTCTTAGATACTTGGAGAACAAGGTTCATAAATGTCACTTACTCGGTTTTCGAAGCTTCACCCTCCGTTCCACACCCGAGCCTAAGGTCCGGGGTTCCGTTGGGTCAACCATGGGCCCATCCAAAGCACAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAAGAAAGTGAAAAGCACTACTTTATCTTCAGCTGATCAAATCAAGGATTGTGGGGCATATCGCAAATGTCCAAGCTGTTATTATCATATTGATAACAGTGATGTTTCTACTGAGTGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCTTAGAACATTTAGCAGCAAAGTGTGGCATTGGGAACTCCCAGCCACACTTGCTTATCAATGAGTTCATCCCAACCCTGGAAGGAGACCAAGGTATTTGCTACACGCATCCTGAAAATCTTGCAGGTGCTAAGAAAGATGGGAATTATGTCCATTTCTTTCACAGAACAACCAATGCATATGCTACTGGTCAACGAAAGCGTCGAAAGATTCATCATCGACAGGGTTTGACAGAAGAGCATGTGCGCTGGCATAAGACTGGCAAGACAAAAGCTATAATAGAAGATGGAGTACATAAGGGCTTTAAGAAGATAATGGTTCTTTATGTAAGATCTAGTGAGAATGGGTCCAAGTGCAATAAATCCAACTGGGTAATGCATCAGTATCATCTAGGGACTGAAGATGAGAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTATCAACAGAAAAAGCAGAATGAGAAAAATGAGGAGAATTCAATGGCTGAAGATCCTGACAATATAACATTGCGAACAAGTCCAAGGACTCCAAAACCAAGCCCCCCCAATCCACCTCGTGCGGGAAAATCTATTGATTGTGATGATTACTTTGATGAAGCATTACTTCTGTCTTCTGCCCAGGATACTAAGACAATCCCTGGAGAATCACATGCCCCACAAATAGATATTCAGGATCAAGACAATGCTGGCAATGCTGCATGGTTTGCTGGTGGATTGCAGGCTGAGGAAAACACCGAATATGATGGCTTGGACGACATCTTATTGTGCAATGAGATCTTAGATTCTTCTGCTGTGTTAAATGACTCTGGATTGGACTCCACCAATCTTGATAACATTGCAAGCTATGCTACCCAAGTGGCTAGAAATGATAATGAATCTTGTGGAATTTCTTTCCTGGATACACTGGAATTGGATACTTCTTCAGATTTTGATCTTTCTTTAAGCCTCCCATCTTATCTAGCTAGAGCTGGAGTTTTGGCCTTCCTTCATGTGAGTTTTTTGTGA 1359 0.4202 MTHKGCSNLVLDTWRTRFINVTYSVFEASPSVPHPSLRSGVPLGQPWAHPKHRSWLIDIGGFAKKVKSTTLSSADQIKDCGAYRKCPSCYYHIDNSDVSTEWPGFPLGVKFDPSDVELLEHLAAKCGIGNSQPHLLINEFIPTLEGDQGICYTHPENLAGAKKDGNYVHFFHRTTNAYATGQRKRRKIHHRQGLTEEHVRWHKTGKTKAIIEDGVHKGFKKIMVLYVRSSENGSKCNKSNWVMHQYHLGTEDEKEGEYVVSKIFYQQKKQNEKNEENSMAEDPDNITLRTSPRTPKPSPPNPPRAGKSIDCDDYFDEALLLSSAQDTKTIPGESHAPQIDIQDQDNAGNAAWFAGGLQAEENTEYDGLDDILLCNEILDSSAVLNDSGLDSTNLDNIASYATQVARNDNESCGISFLDTLELDTSSDFDLSLSLPSYLARAGVLAFLHVSFL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1336 452 SUPERFAMILY NAC domain 90 266 IPR036093 GO:0003677|GO:0006355
Aed9g1336 452 Gene3D NAC domain 114 271 IPR036093 GO:0003677|GO:0006355
Aed9g1336 452 ProSiteProfiles NAC domain profile. 105 266 IPR003441 GO:0003677|GO:0006355
Aed9g1336 452 MobiDBLite consensus disorder prediction 269 309 - -
Aed9g1336 452 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 52 431 - -
Aed9g1336 452 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 52 431 IPR044799 GO:0003700
Aed9g1336 452 Pfam No apical meristem (NAM) protein 106 248 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1336 Aed-Chr9 12089978 12094718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1336 83 268 NAC Transcription Factor Family AT4G28500 52.381 1.22e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed9g1336 NAM 2.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1336 - - gmx:100780442 634.795