Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1325 ATGGAAACCGACACACAAGAAGATTGCAATAATTGGAATAAGGATACAGAGATGAATGAAGTTGATAGTGATGAGTATAATAATGATCATAAGAGTGATGAAGCAAGGAATGATGATGTACCAAAAGGTTATACAAAAATAATAGACTTGACAACTGAACAGATACTTAGACTCAAATTCGATACCGAGTTGGAAGCTTACGAGTTTTATAAAGATTATGCCAAATGTCAAGGCTTTGTTGTTTGGAAAGATGATCTCAAACGTGATAAAAAGAGTGCTAACATTGTGATGCGTCAATTTGTTTACAGTAGAGAGGGGTTCAAAAGCGAAAAACATTTAGATAGAGTAGACCGAATTCGAGATCTGAGGTCCATGGCTCGAATAAATTGTGCAACAAGCTTCATGTGA 408 0.3554 METDTQEDCNNWNKDTEMNEVDSDEYNNDHKSDEARNDDVPKGYTKIIDLTTEQILRLKFDTELEAYEFYKDYAKCQGFVVWKDDLKRDKKSANIVMRQFVYSREGFKSEKHLDRVDRIRDLRSMARINCATSFM 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1325 135 MobiDBLite consensus disorder prediction 7 38 - -
Aed9g1325 135 MobiDBLite consensus disorder prediction 1 38 - -
Aed9g1325 135 Pfam FAR1 DNA-binding domain 68 133 IPR004330 -
Aed9g1325 135 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1325 Aed-Chr9 11720697 11721104 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g1325 FAR1 2.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1325 - K17604 ccaj:109792835 98.5969