Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1303 ATGTGCAGCAAGAACAGTCCTAATTCTTCTCCGGAGATTCAAATTGAAACAACCTCTATCATCATGAAGAGGACGCGGAAGCCGAATAGAAAGTATCACAACTCGTCTTGCTCCTCTTCGTCTTCTTCGACGACGTCGTTTAAGGTGCCGCACCGGCGCGGGAACAGGACGAAGACGCGGAAGCCGAAGTTCGTTAGCCTGAGGCTTCAGCTATCCGGGCCCAAGCCCAAGCCCAAGCCCAAGTCCAAGCCAAAGCCCAAGCCCAAGGACAAACAAATACAGCAGCAGCAGCAGCAACCGGCGCAGTTGAATTTGAATCTCTTCCCACTCCATCCGGAGCAGCACGACATGCACGAGGAGCAGAACGTGGCGCTTCTCTTCAGCTCCGACGGCGGGGCGACGCTGAACGGGCTGCTGGAGGACGAGTCCACGACGACGACGTCGGAGGAGGGATCGATGTCGGTGCTGACGTGTCCGGCGGAGGAGGACGCCGGGAAGTGGCTGGTTCGGAAGGCGATGCGGCGGAGGAGGGAGAGCGAGTCGGAGGGGGAGGGGGAGGAGCGGTGGGTGTGTTACTCGGAGGTGGTGGAGGAGAAGAAGGAGTCGGCGATGGAGGAGGTGACGAGTTATTGCGTGACGGGGAAGACGAAAACGACGACGTCGTTTGGGTTGTTGTCGTTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTCTACGTCGCGAGGGAGGAGGAGGAGGCCCCACAAACTGTTGCATGGGACGGTTGGGCAAGTGGTGGTGTTGTTGGAAACGCATGGAATGTTCCTGAAGGTTGTGGGGCTAACAAGACAAATGTGAAGGAAGAAACAATTAGTTGGAAGTTGGGGCAGAGAGAGGCAAGTGTGCAGAGATACAAGGAGAAGAGGCAAAGCAGGCTTTTCGCTAAGAGGATCCGTTATGAAGTTCGCAAGCTCAATGCTGAGAAACGGCCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1023 0.5582 MCSKNSPNSSPEIQIETTSIIMKRTRKPNRKYHNSSCSSSSSSTTSFKVPHRRGNRTKTRKPKFVSLRLQLSGPKPKPKPKSKPKPKPKDKQIQQQQQQPAQLNLNLFPLHPEQHDMHEEQNVALLFSSDGGATLNGLLEDESTTTTSEEGSMSVLTCPAEEDAGKWLVRKAMRRRRESESEGEGEERWVCYSEVVEEKKESAMEEVTSYCVTGKTKTTTSFGLLSLKLDHEGILNAWSDKGSLYVAREEEEAPQTVAWDGWASGGVVGNAWNVPEGCGANKTNVKEETISWKLGQREASVQRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1303 340 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 43 340 - -
Aed9g1303 340 PANTHER CCT MOTIF FAMILY PROTEIN 43 340 - -
Aed9g1303 340 MobiDBLite consensus disorder prediction 1 100 - -
Aed9g1303 340 MobiDBLite consensus disorder prediction 32 50 - -
Aed9g1303 340 MobiDBLite consensus disorder prediction 1 22 - -
Aed9g1303 340 Pfam CCT motif 297 339 IPR010402 GO:0005515
Aed9g1303 340 ProSiteProfiles CCT domain profile. 297 339 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1303 Aed-Chr9 11123131 11128970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1303 225 339 C2C2-CO-like Transcription Factor Family AT1G68520 44.915 1.39e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed9g1303 CCT 3.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1303 - - gmx:100798231 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1303 9 11123131 11128970 Aed9g1303 9 11123131 11128970 ECH