Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1299 ATGAATGTCAACCAATTAAAATTTGAGTCCAAGGATATTTTTATTCATCAAAAACATGCCTTCAAAGTGGGTTTTAGTGTGAGAAAAGGGAAACAATTGTATTATGATAATGACAAAAAATATACACGCTTGAAAGAATTTTATTGTTCCAAAGAAGAGTCTAAGAACAATAAAGTTGAAGGTGAAGTAGCCTATCAAAGAGCGGATTCAAGAACAAATTACAAAGCAATGGTGCAATTTAATGTGAGCAAGGATGGAGTATGGAAAATTACAAAATTGATAGTGATTCACAATCATGAATTTATGCCACTTGAACAAAGACCATGTTCTACTATGGTGTGTAGTTAG 348 0.319 MNVNQLKFESKDIFIHQKHAFKVGFSVRKGKQLYYDNDKKYTRLKEFYCSKEESKNNKVEGEVAYQRADSRTNYKAMVQFNVSKDGVWKITKLIVIHNHEFMPLEQRPCSTMVCS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1299 115 Pfam FAR1 DNA-binding domain 17 103 IPR004330 -
Aed9g1299 115 PANTHER OS12G0160900 PROTEIN 19 105 - -
Aed9g1299 115 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 105 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1299 Aed-Chr9 10999759 11000162 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g1299 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1299 - - mtr:MTR_6g051425 146.747