Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1290 ATGGACAACTTGATTGTGGGCTCACAACCACAGAAACTCGAAGACATAGATCACCTCAAAAAGGAAGAGGGTGTGGAATACATTCTAAACTTGCAACAGGATAAGGATGTTGAGTATTGGGGAATAGACTTGCAGTCAATAAAAAAAAGGTGCCGTGAACTTGAAATTAGCCACACAAGGAGACCGCTAAATGAAGCATATGATATGCTAACCTCAAAGAGACCTTGTGGACCAAATAAAAGAGCAATACGTGGAGCTACTTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAATCTTCCAGAATATGCATTTGAGGACATAGCAGACTGGGAAAGGAACTTGATTCAAGATCGTGTCCGGTCCCTTCGCGGAACTTGA 390 0.4205 MDNLIVGSQPQKLEDIDHLKKEEGVEYILNLQQDKDVEYWGIDLQSIKKRCRELEISHTRRPLNEAYDMLTSKRPCGPNKRAIRGATYDLAKNDPWKEPFENLPEYAFEDIADWERNLIQDRVRSLRGT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1290 129 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 63 129 - -
Aed9g1290 129 Gene3D Protein tyrosine phosphatase superfamily 2 62 IPR029021 -
Aed9g1290 129 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 2 64 - -
Aed9g1290 129 Gene3D Protein tyrosine phosphatase superfamily 63 129 IPR029021 -
Aed9g1290 129 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 2 64 - -
Aed9g1290 129 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 63 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1290 Aed-Chr9 10819895 10821091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1290 2 62 Protein tyrosine phosphatase (PTP) family AT3G10940 77.049 1.36e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1290 - - egr:104421002 173.711