Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1288 ATGACTCATCAAGCTTCTCTCTCTTCATGGACGGGCAATAATCCTTGCAATTGGCTTGGAATTGCATGTGATGTGTCCAATTCTGTTTCCATCATTAATCTTGCAAATGTTGGATTAGGAGGTATGCTTCAAAGTCTCAACTTCTCTATACTTCCAAATATTCTCACTTTAAATATGAGTCACAACTCCTTGAATGGAAGTATTCCTCCTCAAATTGGGGCCTTGTCCAATCTCAACACTCTTGATTTGTCCACTAATAAACTCTTTGGTAGCATTCCCAATACCATTGGAAATCTTTCCAAACTCTCCTATCTTAATCTTGGTGACAATAATCTCTCTAGTACTATTCCTCATGAAATTGGAAAGTTAAGGAACCTAGAGATTCTCAGGTTATATGGCAATCAACTTTTTGGTCACATTCCTAGTGAAATTGGGAAGTTGGTTAATCTCAAGCGTCTTAATCTTGTAAATAATAGCCTATCTGGACCAATCCCGACTTCCATAGGCAATTTGGTCAATCTGGAGATTCTATATCTCTACAATAATGGTCTTTCTAGCTCCATACCCAAAGAAGTTGGGATGCTGCAGAATCTAATAAATCTTGACATGAGCAACTGTAGTTTCAACGAGTCTATCCCTCATGAAATTGGAAATTTATCCAAACTCTCCATTCTCCAGCTTTATGATTGTGGTGTCTCTGGAACTATTCCTCATGAAATTGGGAACTTGGTTAATCTCAAGCGTCTTAATCTTGGAAATAATAACCTATCTGGACCAATCCCGACTTCCACAGGCAATTTGGTCAATTTGGATTCCATTTATCTTTCTCAAAATAAACTCACTGGATCCATTCCTTCCACCATTGGAAATTTAACGAAGCTCAAGGTATTATCATTATTTGAAAATCAACTTAGTGGCAAGATTCCAACAGAATTCAACAGGCTTATTGGTCTGGAAAATTTGCAGCTAATTGATAATGATTTTATTGGCCAATTACCTCACAACATTTGCATTGGTGGAAAGTTGACACAATTTACCGCTGGCTATAACAACTTTATAGGCCCAATTCCAGAGAGTTTGAAGAATTGCTCTAGCCTTATAAGACTAACTGAGAATATAACTGATGCTTTTGGTATACTTCCAAATTTGGACTACATCGAATTGAGTGACAATAATTTTTATGGTCACCTCTCACCTAACTGGGGAAAGTTCCATAGCCTCACAAGCCTCAAGATCTCCAACAATAATTTATCAGGTGTTATACCACCAGAACTAGCTGGGGCAGCAAAATTACAACAACTTCACCTATCCTCAAACCATCTTACTGGAAACATTCCCCGAGATTTATGTAACTTGATCCTCTTGTTTGATCTCTCACTCAACAACAATAATCTTTCAGGGAATGTTCCCAAAGAAATAACATCAATGCAAAAACTTCAAATTTTGAAGCTTGGATCAAATGATTTGTCTGGCTTAATCCCAAGACAACTTGGAAATTTGATCAATTTATTGAATATGAGTTTGAGTCAAAATAAATTTCAAGGAAATATTCCTTCAGAGCTTGGCAAATTGAAGTTTCTTACAAGTCTTGATCTTAGTGGAAATTCTTTGGGTGGAACAATACCATCAATGCTTGGAGAATTGAAAAGCTTAAAAACATTGAACATCTCTCACAATAATCTTTCAGGTGATCTCTCTAACTTTGATGATATGATAAGCTTGACAACTATTGATATATCATATAACCAGTTTGAGGGTCCAATTCCAAAAATTTCAGCCTTCCACAATGCTAAAATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGCAATGTCATCGGCTTGGAGCCTTGCCCAACATTAAGTGGGAAATCTAATAATCATAAGACAAAGAATGTCATGGCAGTAGTTTTACCCCTTACTTTGGGTACTCTAATATTGGCATTATTTGCGGTTGGAGTCTCATATCATTTATGCCGAACTTCAGCAAAAAAAGAAGACCATACTACAAATTTACAAACTCCAAACATATTTGCAATATTGAGTTTTGATGGCGAAATGATATTTGAAAATATTATTGAAGCCACGGAACATTTTGACAAGAAACATCTCATTGGGGTTGGAGGGCAAGGGTGTGTTTACAAAGCAGTGTTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAACTTCATTCAATTCCAAATGAAGAATTGCTCAATCTCAAAGCTTTCAAAAGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTATAAAATTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTCCTAGAGAAGGGCAGTGTTGAGAAGATTTTGAAGGATGACGAACAAGCAATTGCATTTGATTGGAATAAAAGGGTGAATGTTGTTAAAGGTGTAGCAAATGCTTTATGTTATATCCACCATGATTGCTCGCCTCCAATTGTTCATCGTGACATATCGAGAAAGAATGTTCTTTTGGATTTAGAATATGTAGCTCATGTCTCAGACTTCGGAACAGCCAAGTTTCTGAATCCAAATTCATCCAATTTGACCTCATTTGTTGGCACCTTTGGATATGCTGCTCCAGGTTAA 2619 0.3662 MTHQASLSSWTGNNPCNWLGIACDVSNSVSIINLANVGLGGMLQSLNFSILPNILTLNMSHNSLNGSIPPQIGALSNLNTLDLSTNKLFGSIPNTIGNLSKLSYLNLGDNNLSSTIPHEIGKLRNLEILRLYGNQLFGHIPSEIGKLVNLKRLNLVNNSLSGPIPTSIGNLVNLEILYLYNNGLSSSIPKEVGMLQNLINLDMSNCSFNESIPHEIGNLSKLSILQLYDCGVSGTIPHEIGNLVNLKRLNLGNNNLSGPIPTSTGNLVNLDSIYLSQNKLTGSIPSTIGNLTKLKVLSLFENQLSGKIPTEFNRLIGLENLQLIDNDFIGQLPHNICIGGKLTQFTAGYNNFIGPIPESLKNCSSLIRLTENITDAFGILPNLDYIELSDNNFYGHLSPNWGKFHSLTSLKISNNNLSGVIPPELAGAAKLQQLHLSSNHLTGNIPRDLCNLILLFDLSLNNNNLSGNVPKEITSMQKLQILKLGSNDLSGLIPRQLGNLINLLNMSLSQNKFQGNIPSELGKLKFLTSLDLSGNSLGGTIPSMLGELKSLKTLNISHNNLSGDLSNFDDMISLTTIDISYNQFEGPIPKISAFHNAKIEALRNNKGLCGNVIGLEPCPTLSGKSNNHKTKNVMAVVLPLTLGTLILALFAVGVSYHLCRTSAKKEDHTTNLQTPNIFAILSFDGEMIFENIIEATEHFDKKHLIGVGGQGCVYKAVLPTGQVVAVKKLHSIPNEELLNLKAFKSEIQALTEIRHRNIIKLYGFCSHSQFSFLVCEFLEKGSVEKILKDDEQAIAFDWNKRVNVVKGVANALCYIHHDCSPPIVHRDISRKNVLLDLEYVAHVSDFGTAKFLNPNSSNLTSFVGTFGYAAPG 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1288 872 Gene3D Ribonuclease Inhibitor 2 134 IPR032675 -
Aed9g1288 872 ProSiteProfiles Protein kinase domain profile. 699 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1288 872 Gene3D Ribonuclease Inhibitor 197 367 IPR032675 -
Aed9g1288 872 SUPERFAMILY L domain-like 371 610 - -
Aed9g1288 872 SMART LRR_sd22_2 548 570 - -
Aed9g1288 872 SMART LRR_sd22_2 75 101 - -
Aed9g1288 872 SMART LRR_sd22_2 171 192 - -
Aed9g1288 872 SMART LRR_sd22_2 267 293 - -
Aed9g1288 872 Pfam Leucine rich repeat N-terminal domain 5 24 IPR013210 -
Aed9g1288 872 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 127 - -
Aed9g1288 872 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 110 220 - -
Aed9g1288 872 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 211 871 - -
Aed9g1288 872 Gene3D Ribonuclease Inhibitor 135 196 IPR032675 -
Aed9g1288 872 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 127 - -
Aed9g1288 872 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 110 220 - -
Aed9g1288 872 ProSiteProfiles Leucine-rich repeat profile. 550 572 IPR001611 GO:0005515
Aed9g1288 872 PRINTS Leucine-rich repeat signature 548 561 - -
Aed9g1288 872 PRINTS Leucine-rich repeat signature 527 540 - -
Aed9g1288 872 Gene3D Transferase(Phosphotransferase) domain 1 778 872 - -
Aed9g1288 872 Gene3D Phosphorylase Kinase; domain 1 659 777 - -
Aed9g1288 872 SUPERFAMILY L domain-like 17 370 - -
Aed9g1288 872 SMART LRR_typ_2 171 195 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 429 452 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 51 75 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 123 147 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 404 428 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 291 315 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 99 122 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 476 499 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 243 267 IPR003591 -
Aed9g1288 872 SMART LRR_typ_2 524 548 IPR003591 -
Aed9g1288 872 ProSitePatterns Tyrosine protein kinases specific active-site signature. 823 835 IPR008266 GO:0004672|GO:0006468
Aed9g1288 872 Gene3D Ribonuclease Inhibitor 476 619 IPR032675 -
Aed9g1288 872 SUPERFAMILY Protein kinase-like (PK-like) 680 871 IPR011009 -
Aed9g1288 872 Pfam Protein kinase domain 700 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1288 872 Gene3D Ribonuclease Inhibitor 368 475 IPR032675 -
Aed9g1288 872 Pfam Leucine Rich Repeat 245 263 IPR001611 GO:0005515
Aed9g1288 872 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515
Aed9g1288 872 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 211 871 - -
Aed9g1288 872 Pfam Leucine rich repeat 381 441 IPR001611 GO:0005515
Aed9g1288 872 Pfam Leucine rich repeat 527 584 IPR001611 GO:0005515
Aed9g1288 872 Pfam Leucine rich repeat 76 136 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1288 Aed-Chr9 10662268 10665385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1288 2 872 Receptor kinase-like Gene Family AT4G08850 44.319 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed9g1288 Pkinase 7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1288 - - gmx:100808316 1126.31