Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1278 ATGTTGATGGATTGCGTCTCCGGTTTTGCATCTTCTATTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAGTTGCATTATCCTTGTTGCTTTAACAATTTCGTGGAAGATCTTGAGAAAGAAGAAAAAAATTTGATTTCAACGAGAGACTGTGTCCAAAAACGTGTTGCAGATTCCAAGAGACAAACAAGAGAGACTGCTGAAGTTGTTGTCAAGTGGTTGCAAGAAGCTAACACTGATGTAGAGAAAGTGAAACAGTTGCTGGAAGAAGCAAGAACAAGAAAGAGTTGTTGTTTTGGACACTCTCCAAATTGGATTTGGCGATACCGTTTGGGAAAGAAGTTAGCAAATAAAACTAGGGACCTTGAAAAGTTCATTAGAGAGGGTAGGAATTATGCCCCATTTGATCGCATTATTACTCTTCCTTCTGGCACAGCTGATATTCTCTCAGAAAATTGTATGAATTTTGAGAGTAGAGAATTTGCTAATGAACAACTAATGAAAGCACTCAAAGATGATGAGGTTGTCATGATTGGATTATATGGAATGGGGGGTTGCGGTAAAACCACGTTAGCAATGGAAGCTAGGAAGAAAGCAGAAGCAGAGCATCTTTTTGACAAAGTTCTTTTTGTTCCCGTATCCAGTACTGTGGATGTTCGGAGGATCCAAGAAAAAATTGCAAGTTCAATGCAATATCCATTTCCAGAAAATGAAGAAAGCGAGAGAGCCCAACGCTTATGCATGCGATTAAGACAAGAAAATAAGATTCTTTTGATTCTAGATGATGTGTGGGAGAAACTTGATTTTGGTGCCATAGGGATTCCCTCCTTTGAACATCATAAAGGCTGCAAGGTTCTCATTACCACCAGATCAGAAGAAGTTTGTACTTCAATGGATTGCCAAAGAAAGATTTTCCTGCCAATCTTAAATGATGAAGAAGCTTGGGCTCTTTTCCAAAAGAAATCACTTATATCTGAAGACACATCTGATACCATAAAGCAATTGGCAAGAGTAATTTCAAATGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTCGCTAGTAGCTTGAAGGGCAAAGCTGAGGTGATATGGAAGGTTGCATTGGATAGAATGAGAAGTTCTAAGCCATTAAATATTGAAAAAGGATTGATAAATCCTTACAAGTGCTTGCAGTTGAGCTATGATAATTTGGATACTGAAGAAGCTAAATCACTTCTCCTATTGTGTTCTGTTTTTCCTGAAGATTATGAAATTTCAATTGAACTTTTAACAAGATGTGCAATAGGGTTAGGTGTAGTTGGAGAAGTTAGATCCTATGATGAGGCAAGGAGTGAAGTGATTGCAACGAAAATTAAGCTGGTAAGTTCTTGTTTGTTGTTGGATGCTCATGGTAAACGTGTCAAAATGCATGACTTAGTTCGGGATGTAGCCCACTTGATAGCAAAGCATGACAATAAGGTAATAAAGTGCGAATTGGAAAAGGACGTGACTTTGGAGGAAACTTCAATAAGATATCTATGGTGTGCGAAATATCCAAATGATTTGGACTGCTCCAATCTTGAGTTTCTTTGCATACGTATAAAGACAAAATTGGAAGAATTTGATGGAATTCTAAAAAGAATGGAAAAGCTCAGAGTTTTGATTCTTCACAATGAACAGTCGGTCTCGTTGTCAAAAATTTCTTTCAAAACATTAAAAAATCTTCGTTTTCTACTCCTCCGCGGATTTGAAATGACAGACATCTCATTTGTGAGTGATATGAAGAAACTTCAAGGTCTTTCCCTGCATTTATGTTCATTGCCTTCAATTTTTGAATTGCAGACCGATGTTATAGTTACACAGCTACCAAACTTGAAATTGTTAGAGTTACATGAATGTGACATGAAAAGGACAAATTTTGATCTGATGGAAAGAATTCCACGACTAGAAGAATTGTACATCATTGATTTGCAAGGAGAATGGAGAGCTTCTAGTGAAAACACTATAGAATTCTTTAACACCTTCAGTGTTCCCCAAACATTACAAAGGTATGGAATTGTCTTCGAATCTAATCGTTTTTATAACTACAATACAGGAGAGCTTTGCTCTGATCACAGTACTTTATTGCTTCCCTATTTTCACATATCAAATGTGGCAATTAAGGGTTTGGCAAAAAAAGCAAAAGAACTATACGTAGCAAATATCCAGGGAGGTGCAAAAAACATCATCCCTGATATATTTCAAATTGAAGGAGGTATGAATGAATTGAATAAACTTGAGATAGGTGATTCCGAAGAGATAGAGTGTTTGGTTGACACTACTGATCATTTATGTCAAGTGGGAACTCTTTTCTCCAAGTTGCATACGTTGAGAATCTGTGATATGAAACATATAAGAGCTTTATGGCATGGTTGTCTACCTCCCGGTGGGACTTTTCAGAAATTAGAGAAGTTGTATTTAAGAGATTGTCCCTTTTTGACATATCTCTTCACACATGTCATTGCTCAAAGTCTTGTACAATTGAAAATATTAAAAATATCAGGATGTGATGAATTGAAGCATATAGTAGCAGATGATGACAAAACAGAGAAAAGTGAAGATGAATTCAAGATTGGGCATCATGTACAATCCCCAATCTTCCAAAATCTCCAAGAAGTGGTGGTAGATAGTTGTGGAAAACTAAAACATGTATTCTCAGCCGGTATCGTAGGAGGCCTGCCTCAATTAAAAGAATTGAGGATAGAAGATTGCAGTGATCTAGATAAAATAATTGAGGATATTGTTCCATCAGCATACGAGGATAAAAAAGAAGAAGTAGATGAAATCATTTGGGATCCTCATGTTGAAAGCACTTCGGTTCCATCCATTGTGAACCATAGCTCAGGATCGTTTACTCTATCCAACCTTGCAAGGCTTCAGATAGTATCTTGTCCAAAGTTGGGCTCATTGTTTATGGCATCTGCAGCTAAGACCATCACTTCGTTGGAAAATTTGTTTATATGGGATTGCGAAGGATTGAAGCATATAATAACTGATGAAAGAGTCAATAAATATCAAAAGGAAAACATCGTTGAGGATGATGACCATGACTTTCAGACTGATATTTCAATGTTCAAAAGTTTGAAAATGCTAAATATTATTGAATGTGACTTATTGCAACATATTTTCCCGGTCCCTTTCGTTGGAGGCCCGATGAAATTGAATGATCAACAACAAAATAATACTGAGATTGAGCTTCATGCTTTAGAACAACTCGGGCTTCGTCGTATCTCGAAGAGCATCATCCCAGACAATTATGATGTAAGATGTCCATCTTTGGGAATATTATCATTGGATTCAGAAGGGATTCAAGAATATTTGTCGTTGTCAGATCTACCTCTAATGACTAATATATGGGCGGCTTCCAAGAATTCATTTACCCTCCAACGTCTTAATACATTGAGAATAGAGGGATGTGCAAAATTGGAAGTAATCTTTCCTCCAGCTGTTTTAAGATGCCTACCAGAATTGAAACTTCTAGTGATAAAAAATTTCAAAGAATTAAAGCAGATCATTAATGAAGAGGAGGTGGAGGATAAAAATTTGTCCACTCTTGTTTCTCCAAAACCATGCTTCCCAAAACTAGCTACATTGCTTGTTGAACAATGCCATAAATTGAAACGTTTATTCCCTGCATCTGCATCTGCATCTAATGATCTTCCCAACTTGGAGGTTTTGATCCTAAACAGGGCCATTGAACTAGAAGAACTTATTGGGTGTGAACAAGTGAAAGCTGATCGGATAGGAAAGGCCAATGTTGAGCTTCCAAAACTCAATCTTTTAATATTTCTTCATCTTCCAAACTTTCGCCAAGAGATCGAACCGATGAACGTAAAGCATCATATTGTTCACAATTGTCCAAAACTCTCAGTGACTTCAACAACTACTCTTCGGGAGCTTTGTCAAAATATACGTGATGATTTAGGATACACTGGACTTTCTCATTGGGAGATAAACGACATGATTTGTCAAATAAACGAATACGATGAAGTTTCTGGAAGCAGCAGTACTAGTGAGTTGGCTTCATCACAGGAGAACAATCCTATTCCAGAAACCACTCCATTTGAAATGAACCAAGATCATCCATCAATATCCAAAACTAAGTCACCTTCTTCACAAGTCAATGATAACAATCAATCTATGATGGGAAACATAGCTGAAATGGTTCATGAAAATATTAGAAGTGGAGCACTTGTGCCTGAAATGGCATCACACTTACAATCCTTGGAGCAAAAATTGTTACCCATTTCTTCCTCAAACATGACAAAGCAGGAGAACAATCATATTCTAGAAACCACTTCATTTGAAATGAACCAAGATCATCCATCAACATCCAAAACTAAATCACCTTCTTCACAAGTCAATGATAACAATCAATCTATAATGGGAAGCATAGCTGAAATGGTTCATGAATATAAGCAAATTGAAAGTGAAACAGACAAGCTCCTTGAATTAGAGGGAGAAAACAAAATGGCATCACATTCACAATCGTTGGAGCAAAAATTGCCACCCATTTCTTTCCTAAACATGCCAAAGTTGGTGGATGAAGAATCAAGCAATGAGGCAGGTTTTCCAGACCAACAAGCACTTGTAGAAACAATGAATATTGAGGAAATAGGTAAAGAAAGCATTCAAAAGGGGCATCCATCAAATGGAGCTATAGTAAAATCATTGTCATCTGGTGGTAGGAACATAGTTGCACAAGATGATAAGCTGAATGAAGGCAAGACAGCAATAATGTCATGTCAAGAAATCCAAATCCAAGAAGGATTAATAGGCATTGTTTCTGAAAACATCATTGATGTTTCTTTAGATACCTATTCAAGATTGGGAGCATATAAGCACTTAGTTGATCTTGATGATGCACAAATTGCTCTATTGTTGGAGGCAATAACAACATATCCTCATCTTTGGAGAGCTTGTGAGAAGTTCAGTGAGCGCTTTCGAGCTTTAATGTTAAAAACTTTGGCAGAAATTTTGTTCTTCCTACGGAATGAAACTGCCGTTAGCATTAGTCCTCAGAGCGAAAACGAGTTCCATAGACTATGTGATGAAGCTGTGCAACTTGGATTTGAGAGATCATGGGTTGATGAAATACGTCAACGTGTTGTGGCGAGCCATCCTGAGTTGGACAATGCACAAGCACGAATCAAGGAGCTTCTTGAGAGGCGTAATCATTTAACTCAGGAACTACAAGACATACAGGATGAACTTAAGATTCTTAATGACTTTGTTGATGCCCAAACAAAATGTTTTGACTTTTTGTGA 5289 0.3723 MLMDCVSGFASSISRDLVCGALNQLHYPCCFNNFVEDLEKEEKNLISTRDCVQKRVADSKRQTRETAEVVVKWLQEANTDVEKVKQLLEEARTRKSCCFGHSPNWIWRYRLGKKLANKTRDLEKFIREGRNYAPFDRIITLPSGTADILSENCMNFESREFANEQLMKALKDDEVVMIGLYGMGGCGKTTLAMEARKKAEAEHLFDKVLFVPVSSTVDVRRIQEKIASSMQYPFPENEESERAQRLCMRLRQENKILLILDDVWEKLDFGAIGIPSFEHHKGCKVLITTRSEEVCTSMDCQRKIFLPILNDEEAWALFQKKSLISEDTSDTIKQLARVISNECKGLPVAIAAVASSLKGKAEVIWKVALDRMRSSKPLNIEKGLINPYKCLQLSYDNLDTEEAKSLLLLCSVFPEDYEISIELLTRCAIGLGVVGEVRSYDEARSEVIATKIKLVSSCLLLDAHGKRVKMHDLVRDVAHLIAKHDNKVIKCELEKDVTLEETSIRYLWCAKYPNDLDCSNLEFLCIRIKTKLEEFDGILKRMEKLRVLILHNEQSVSLSKISFKTLKNLRFLLLRGFEMTDISFVSDMKKLQGLSLHLCSLPSIFELQTDVIVTQLPNLKLLELHECDMKRTNFDLMERIPRLEELYIIDLQGEWRASSENTIEFFNTFSVPQTLQRYGIVFESNRFYNYNTGELCSDHSTLLLPYFHISNVAIKGLAKKAKELYVANIQGGAKNIIPDIFQIEGGMNELNKLEIGDSEEIECLVDTTDHLCQVGTLFSKLHTLRICDMKHIRALWHGCLPPGGTFQKLEKLYLRDCPFLTYLFTHVIAQSLVQLKILKISGCDELKHIVADDDKTEKSEDEFKIGHHVQSPIFQNLQEVVVDSCGKLKHVFSAGIVGGLPQLKELRIEDCSDLDKIIEDIVPSAYEDKKEEVDEIIWDPHVESTSVPSIVNHSSGSFTLSNLARLQIVSCPKLGSLFMASAAKTITSLENLFIWDCEGLKHIITDERVNKYQKENIVEDDDHDFQTDISMFKSLKMLNIIECDLLQHIFPVPFVGGPMKLNDQQQNNTEIELHALEQLGLRRISKSIIPDNYDVRCPSLGILSLDSEGIQEYLSLSDLPLMTNIWAASKNSFTLQRLNTLRIEGCAKLEVIFPPAVLRCLPELKLLVIKNFKELKQIINEEEVEDKNLSTLVSPKPCFPKLATLLVEQCHKLKRLFPASASASNDLPNLEVLILNRAIELEELIGCEQVKADRIGKANVELPKLNLLIFLHLPNFRQEIEPMNVKHHIVHNCPKLSVTSTTTLRELCQNIRDDLGYTGLSHWEINDMICQINEYDEVSGSSSTSELASSQENNPIPETTPFEMNQDHPSISKTKSPSSQVNDNNQSMMGNIAEMVHENIRSGALVPEMASHLQSLEQKLLPISSSNMTKQENNHILETTSFEMNQDHPSTSKTKSPSSQVNDNNQSIMGSIAEMVHEYKQIESETDKLLELEGENKMASHSQSLEQKLPPISFLNMPKLVDEESSNEAGFPDQQALVETMNIEEIGKESIQKGHPSNGAIVKSLSSGGRNIVAQDDKLNEGKTAIMSCQEIQIQEGLIGIVSENIIDVSLDTYSRLGAYKHLVDLDDAQIALLLEAITTYPHLWRACEKFSERFRALMLKTLAEILFFLRNETAVSISPQSENEFHRLCDEAVQLGFERSWVDEIRQRVVASHPELDNAQARIKELLERRNHLTQELQDIQDELKILNDFVDAQTKCFDFL 1762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1278 1762 SUPERFAMILY L domain-like 469 1042 - -
Aed9g1278 1762 MobiDBLite consensus disorder prediction 1442 1465 - -
Aed9g1278 1762 Gene3D - 309 393 IPR042197 -
Aed9g1278 1762 MobiDBLite consensus disorder prediction 1340 1386 - -
Aed9g1278 1762 SUPERFAMILY RNI-like 1075 1274 - -
Aed9g1278 1762 Coils Coil 1717 1751 - -
Aed9g1278 1762 Gene3D - 394 479 IPR036388 -
Aed9g1278 1762 PANTHER - 874 919 - -
Aed9g1278 1762 PANTHER - 938 1189 - -
Aed9g1278 1762 PANTHER - 29 766 - -
Aed9g1278 1762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 410 IPR027417 -
Aed9g1278 1762 PRINTS Disease resistance protein signature 250 264 - -
Aed9g1278 1762 PRINTS Disease resistance protein signature 343 357 - -
Aed9g1278 1762 PRINTS Disease resistance protein signature 830 846 - -
Aed9g1278 1762 PRINTS Disease resistance protein signature 177 192 - -
Aed9g1278 1762 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 874 919 - -
Aed9g1278 1762 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 29 766 - -
Aed9g1278 1762 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 938 1189 - -
Aed9g1278 1762 Pfam NB-ARC domain 164 397 IPR002182 GO:0043531
Aed9g1278 1762 Coils Coil 35 55 - -
Aed9g1278 1762 Coils Coil 74 94 - -
Aed9g1278 1762 Gene3D - 148 305 IPR027417 -
Aed9g1278 1762 Gene3D Ribonuclease Inhibitor 1022 1244 IPR032675 -
Aed9g1278 1762 Gene3D Ribonuclease Inhibitor 688 862 IPR032675 -
Aed9g1278 1762 Gene3D Ribonuclease Inhibitor 863 1020 IPR032675 -
Aed9g1278 1762 Gene3D Ribonuclease Inhibitor 480 676 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1278 Aed-Chr9 10400250 10422146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1278 178 572 WRKY Transcription Factor Family AT5G45050 23.267 1.12e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1278 - - vun:114195691 1719.9