Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1254 ATGAAGCAACTCAGGCAAACATTGGATGCTGCTGTCGGGGATACATCAATAATGGCATATAGATATCATTTAGTTGACTTCTCACAACCTTATATTGAATCTGGCCTTGACATGGTGGTGTGCCATGTAGAGATTGGTGGTAGTTGTGAGGAAAATTTGGAATTGAAGATTAATTCATAA 180 0.3833 MKQLRQTLDAAVGDTSIMAYRYHLVDFSQPYIESGLDMVVCHVEIGGSCEENLELKINS 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1254 59 Gene3D - 2 56 - -
Aed9g1254 59 SUPERFAMILY Periplasmic binding protein-like II 6 40 - -
Aed9g1254 59 PANTHER GLUTAMATE RECEPTOR 2 42 - -
Aed9g1254 59 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1254 Aed-Chr9 9985460 9988553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1254 7 40 Ion Channels AT2G29110 58.824 4.97e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1254 - - pvu:PHAVU_008G150400g 70.4774