Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1230 ATGAGATATTTTAACCTCTATCTTGTGGTGGCTCTTACTTGGTTTTTTTTGTCTATGCCTTGCTCCCATGAACTACAGCTTGCTCAGACACAAGTTCTGTTACAGTTAAGAAAGTATCTGGAGTACCCTACCTCTCTGCAAATATGGCAAAATTACAATGAGGACCTTTGCAGCCTTCCTCCATCAGCATATGTGAGCCTCAAGTGTGAGGGAAATTCAGTAACTGAGCTCAAAATCATGGGAGATAGAGCTGTGAGTGTGAAGGTTGTTGACAAGTTCAATGGATATGCAGTTCCCAATAAGACACTCTCACCGAGCTTCTCCATTGATTCTTTTGTCACCACATTGGCAAGGCTAACCAACTTAAGGGTCCTTAGATTGGTGTCATTGGGGATTTGGGGGCCACTTCCTAATAAAATCCATAGGCTTTCTTTGCTTGAAGTTTTGGATATGAGCTCAAATTTCCTGTATGGCTCAGTGCCACCAAGAATGTCTACAATGGTCAAGCTTCACACACTGACACTAGATGGAAACTTCTTCAACAGCACAATGCCTGATTGGTTTGATTCTTTGTCTAATCTAAATGTCTTGAGTTTGAAGAGTAATCACTTAAAGGGTTCATTTCCCTCTTCGCTAAGCAAAATTAGGAGTCTTTCTGATATTTCCTTGTCACACAATGAATTGTGTGGTGCATTGCCTGATCTCACTGCTCTCTCTGGCCTACATGTTCTTGATTTAATAGAAAATCAATTAGATTCTAAACTTCCTTTGATGCCTAAAGCAGTGATCACAATTCTTCTTAGCAAAAACTCTTTCTCAGGTGAGATACCAAAACAGTTTAGTCAATTGGATCATCTTCAACATCTGGATCTTTCGTCAAATCGTCTCAGTAAGACGCCTCCATCTTCCTTGTTCTCTTTGCCAAACATTAGCTATTTGAACTTAGCCAGCAATGAGCTAAGTGGTTCTCTTCCACACAAACTAAACTGTGGGAGCAAACTTGGGTTTGTGGATATCTCTAGTAACAAGTTAAGTGGTGGAGTTCCTTCTTGCTTGGCCAATGCATCTGGCAAAAGGGTTGTTAAATATGGTGGAAACTGTTTGTCTGTTGATGATTCTCAACCTCAGCGGCGAGGGACTTATTGTAAAGAGTCCGGCTCGCAAAGGAAGAGCTTCTGGAAATGGAAAATAGCTGCAGCAATTGCCATGATTGTTGTGATTGTTCTTGTGCTTTCAGCTTTTGGAGTTTTCTTTTATAGAAAATGTCATTCAAGGAAGAAGTATAGGCATGAGATGTTGCCTAAGGCTGTTCAAGATAACTCAACAACAGGAGTTTCTTCTGAACTCCTTGCTAGTGCTAGATTCATTTCTCAAGTAGCAAAGCTAGGGACACAAGCTACTCCTACATGTAGACAATTTTCAATTGAAGAGTTGAGGGAAGTCACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGCTCCTTAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGAACCTATGTGGTGATAAGATGTCTGGCTCTGTCAAAGAAATGCTCAATACAAAATCTTAAAGTTTGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGATGGTGTTGGACAAGATGATTCTAGTGGCCTCAAACTTCATCTTGTTTATGAGTATGTGCTGAATGGGAATTATCGTACCCATTTGTCAGAATTTTCATCAGACAAGGCACTAAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTGGCCAAAGCTGTGCATTTTTTGCATACTGGGGTTAAACCTAGTTGTTTTAGAAACCAATTGAAGACAAACAATATTCTACTTGATGAGCATCACATTCCCAAACTAAGTGACTATGGTATGTCCTTGATTTCTGGGGAGATTGAATACCTTGAGATGAATACCAACAATCTGCTGTTCTTTTCTTTCTCTTGCAGCCAAAGAGCAAAATTAGAAGATGATGTCTATAATTTCGGATTGATATTGTTTGAATCTCTTGTTGGACCCATAGCAAGCGAGAAAGGGGAGAAATATTTTTTTGATGAAAAGACATCCTTTGACAGTCAAGATGGCAGAATTAAAATAGTGGATCCAGTAGTGTTAACCACATGCTGTCCAGAGTCATTATCAATTGCAATATCAATCACAACCACATGCATATCCCCAGAATCTTCATCACCTCCTCCCTCTTTTGAGGATGTCTTGTGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGACCAAAAATCAGATTCCACATCCAACAATGCAGCAGATAGAGAAAGCAGGGATTGTTCACTAGGGTCTATAAGCTAA 2382 0.398 MRYFNLYLVVALTWFFLSMPCSHELQLAQTQVLLQLRKYLEYPTSLQIWQNYNEDLCSLPPSAYVSLKCEGNSVTELKIMGDRAVSVKVVDKFNGYAVPNKTLSPSFSIDSFVTTLARLTNLRVLRLVSLGIWGPLPNKIHRLSLLEVLDMSSNFLYGSVPPRMSTMVKLHTLTLDGNFFNSTMPDWFDSLSNLNVLSLKSNHLKGSFPSSLSKIRSLSDISLSHNELCGALPDLTALSGLHVLDLIENQLDSKLPLMPKAVITILLSKNSFSGEIPKQFSQLDHLQHLDLSSNRLSKTPPSSLFSLPNISYLNLASNELSGSLPHKLNCGSKLGFVDISSNKLSGGVPSCLANASGKRVVKYGGNCLSVDDSQPQRRGTYCKESGSQRKSFWKWKIAAAIAMIVVIVLVLSAFGVFFYRKCHSRKKYRHEMLPKAVQDNSTTGVSSELLASARFISQVAKLGTQATPTCRQFSIEELREVTRNFDLSTYIGEGSLGKLYKGKLENGTYVVIRCLALSKKCSIQNLKVWLDLLSKLHHPNLVSLLGHCIDGVGQDDSSGLKLHLVYEYVLNGNYRTHLSEFSSDKALKWSDRLAILIGVAKAVHFLHTGVKPSCFRNQLKTNNILLDEHHIPKLSDYGMSLISGEIEYLEMNTNNLLFFSFSCSQRAKLEDDVYNFGLILFESLVGPIASEKGEKYFFDEKTSFDSQDGRIKIVDPVVLTTCCPESLSIAISITTTCISPESSSPPPSFEDVLWNLQYAAQVQATADADQKSDSTSNNAADRESRDCSLGSIS 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1230 793 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
Aed9g1230 793 SMART LRR_typ_2 283 306 IPR003591 -
Aed9g1230 793 SMART LRR_typ_2 143 167 IPR003591 -
Aed9g1230 793 SMART LRR_typ_2 191 214 IPR003591 -
Aed9g1230 793 SMART LRR_typ_2 307 331 IPR003591 -
Aed9g1230 793 ProSiteProfiles Protein kinase domain profile. 485 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1230 793 PANTHER OS07G0166700 PROTEIN 2 773 IPR045272 GO:0004714|GO:0006468
Aed9g1230 793 Gene3D Phosphorylase Kinase; domain 1 454 568 - -
Aed9g1230 793 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Aed9g1230 793 Pfam Leucine rich repeat 265 320 IPR001611 GO:0005515
Aed9g1230 793 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Aed9g1230 793 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 773 - -
Aed9g1230 793 SUPERFAMILY Protein kinase-like (PK-like) 467 756 IPR011009 -
Aed9g1230 793 Gene3D Ribonuclease Inhibitor 261 385 IPR032675 -
Aed9g1230 793 Pfam Protein tyrosine and serine/threonine kinase 487 683 IPR001245 GO:0004672|GO:0006468
Aed9g1230 793 Gene3D Transferase(Phosphotransferase) domain 1 570 785 - -
Aed9g1230 793 SUPERFAMILY L domain-like 116 368 - -
Aed9g1230 793 MobiDBLite consensus disorder prediction 765 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1230 Aed-Chr9 9622398 9627300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1230 1 700 Miscellaneous Gene Families AT5G14210 55.932 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aed9g1230 PK_Tyr_Ser-Thr 4.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1230 - - gmx:100813412 1256.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1230 9 9622398 9627300 Aed9g1230 9 9622398 9627300 ECH