Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1226 ATGATGATTGCAATTCACATGATGAAGGCTTTGGTCTTTTTCCTTTGGCTCTTTGTCCCCTCATGGTGCAAATTGGACCTTCTAAGCTGTGAGACAACTTCACCTGATGCCTCTGGCTACCATTGCAACAACATTGAAAAAAATAATGTTTTTGTGTCATCATCACAATCACAACAACAACAATGTGAGACATTTGCACTCTTTCTCACAAACTCTTACTACTCCTCTCTCTCCAACCTCACCTCCTACTTAGGACTCAACAAACTTGTCATAGCAAAAGCCAATGGTTTCTCTGCAGACAACACTGAGTTCCTCTCCCAGGACCAGCCTCTTCTGATTCCTATTGTTTGCAAGTGCAGTAAAAGTGGCTTCTCTCAGGCTGAGTTGACAAAAACTTCCATCAAAGGTGAGAGCTTTTATGCCATTGCTCAATCACTTGAGGGCTTGACAACTTGCAAGGCTATTAGGGAACACAACCCTGGTGTCTCACCTTGGAACCTTGATGACAATGTGAGATTGGTTGTTCCTTTGAGATGTTCCTGCCCTTTGTTTTCATCTCAAGTTAGACTTAGACCACAACAACCAAAGCTTCTTCTTTCTTATCCATTAAGAAAAGGTGACACTCTTTCCAATTTGGCCTCAAAGTTCAATACTACTAAAGAAGCTATTGTTTCTTCTAATAGTAACATATCATCATCATCATCACAAGGCCTTAGGAATAGAACTAGTCTTAGTCTTGAACCCTTTACCTCTATTCTCATTCCACTTAATGGTAAACCTGTTATTGGTCCTTTGCAAACAACTCGCATCACCCCAGTGACAAGTCCACTACACAAGAAGAAGTCACCAATGTGGAAGACTGAATTGTGCATTGGCCTAGTAGCTGGGGTTGCATTTGGACTCTTCATTGCTTTTGCTGCTGTCTTTTTCCTCATCAGATTGAAGCACAAGAAGGAGGATGAAGAGAAAAATTCATGCAAAGAAGGGGACTTGGAGCTGCAATATCTTAATCAAAGTGTAAGAACCACCTCAACTAGTGACAAGAAAGTCTCATTTGAAGGGTCTCAGGAGGATGATGCTCTTGATGTGAAGATCGTGGACGACACCACCATGCTGCCGCGGAAGCTGTTGCTGGATGCATACACCATTGAAGATGTGAAGAAAGCAACTGAGGATTTCAGCTCAAGCAATCAGATTGAAGGGCCGGTGTATCATGGCCGGCTGAACGGGAAGAACATGGCAATCAAAAGAACAAAGGCAGAGGTAGTGTCAAAGATAGACCTTGGCCTTTTCCATGATGCAATCCACCACCACCCCAACATACTTAGGCTTCTTGGAACTAGCATGATGTTGGAGGGGTTGGAGGAGCAAGAAGAGTCATTTCTAGTTTTCGAGTATGCCAAAAACGGTTCATTGAAAGATTGGCTCCATGGTGGATTAGCCATCAAGAACCAATTCATTGCTTCATGCTACTGCTTCCTGACATGGAGCCAAAGGCTAAGGATCTGCCTTGATGTGGCCACTGCCTTGCAGTACATGCACCATGTCATGAATCCAAGCTATGTCCATAGAAATGTGAAAAGTAGGAACATCTTTTTGGATGAAGAGTTTGGTGCCAAGATAGGGAATTTTGGCATGGCAAGTTGTGTTGAAAACAATGACACTGAGGACCCTCAATTCTACTCCACAAACCCTTCCTCTTGGAGTCTTGGTTATTTGGCACCTGAATATGTTCACCAAGGTATAGTTTCACCAAGTGTTGATGTCTTTGCATATGGTGTTGTTTTGTTGGAGGTTTTGTCTGGTCAAACACCAATAAGCAGGACTAATGAGAAGGGTGAAGGGAGCATTTGGCTCACAGATAAAATCAGGTCCATTTTGGTGTCTGAAAATGTGAATGAGCTGAGAGAATGGATAGACAGTGCATTGGGGGAGAACTATTCATTGGATGCAGCTGTGACACTTGCAAACATTGCAAGAGCTTGTGTGGAGGAAGATTCTTCTCTGAGGCCAAGTGCAAGGGAAATTGTTGAGAAGATTTCAAGATTGGTGGAGGAATTGCCTCAAGGGGAAGAACAACACTTGTTGTTATTGAGTGAAAGCTCTAGCAAACCTCTTGTGATGGTAGTGGAAAACAACAATCTTGAATAA 2151 0.4282 MMIAIHMMKALVFFLWLFVPSWCKLDLLSCETTSPDASGYHCNNIEKNNVFVSSSQSQQQQCETFALFLTNSYYSSLSNLTSYLGLNKLVIAKANGFSADNTEFLSQDQPLLIPIVCKCSKSGFSQAELTKTSIKGESFYAIAQSLEGLTTCKAIREHNPGVSPWNLDDNVRLVVPLRCSCPLFSSQVRLRPQQPKLLLSYPLRKGDTLSNLASKFNTTKEAIVSSNSNISSSSSQGLRNRTSLSLEPFTSILIPLNGKPVIGPLQTTRITPVTSPLHKKKSPMWKTELCIGLVAGVAFGLFIAFAAVFFLIRLKHKKEDEEKNSCKEGDLELQYLNQSVRTTSTSDKKVSFEGSQEDDALDVKIVDDTTMLPRKLLLDAYTIEDVKKATEDFSSSNQIEGPVYHGRLNGKNMAIKRTKAEVVSKIDLGLFHDAIHHHPNILRLLGTSMMLEGLEEQEESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLTWSQRLRICLDVATALQYMHHVMNPSYVHRNVKSRNIFLDEEFGAKIGNFGMASCVENNDTEDPQFYSTNPSSWSLGYLAPEYVHQGIVSPSVDVFAYGVVLLEVLSGQTPISRTNEKGEGSIWLTDKIRSILVSENVNELREWIDSALGENYSLDAAVTLANIARACVEEDSSLRPSAREIVEKISRLVEELPQGEEQHLLLLSESSSKPLVMVVENNNLE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1226 716 Pfam Protein kinase domain 403 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1226 716 PANTHER PROTEIN LYK2 6 710 - -
Aed9g1226 716 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 710 - -
Aed9g1226 716 Pfam LysM domain 204 234 IPR018392 -
Aed9g1226 716 ProSiteProfiles Protein kinase domain profile. 372 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1226 716 SUPERFAMILY Protein kinase-like (PK-like) 374 678 IPR011009 -
Aed9g1226 716 Gene3D Transferase(Phosphotransferase) domain 1 467 698 - -
Aed9g1226 716 ProSiteProfiles LysM domain profile. 199 246 IPR018392 -
Aed9g1226 716 Gene3D Phosphorylase Kinase; domain 1 366 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1226 Aed-Chr9 9581714 9583864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1226 46 707 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.030 6.72e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed9g1226 Pkinase 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1226 - - gmx:100816082 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1226 9 9581714 9583864 Aed9g1226 9 9581714 9583864 ECH