Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1221 ATGCCGGAAGAAACGACGTCGATCGACTACGTCATGGAGGCGGCCAACGGGCCCCACTTCTCCGGCCTCAGACTCGACGGCCGGCTGCTGTCCTCCTCCTCCGCCACCGCCGCCGCGTCTCCCACTGCCGATTCAACCCCCAATCAACCCTTCGTCATAGGAGTTTCCGGTGGTACTGCCTCGGGAAAAACCACCGTCTGCGACATGATCATTCAGCAACTCCACGACCACCGCGTCGTCCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAAACCTGAAGAGTCCGAACGCGTTCACGAGTACAATTTCGACCACCCCGATGCATTTGACACGGAACAGTTGTTGGAGTGCATGGGGAAGCTCATCAGTGGCCAGGGCGTGCATGTTCCCATTTACGACTTCAAGAAGCACCAACGCTCTTCTGATAGTTTTCGCCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGGATTCTTGTGTTCCACGATCAGGGTGTGCGCGATCTCATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGATACCGTGGAGAGGGGCAGGGATATAAATTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTGGCCATTGATTTGATTGTGCAACATATCCGTACAAAGCTTGGCCAACATGATCTATGCAAAATATATCCAAATGTCTATGTTATTCAGTCTACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACCGTGAGATATCAAAGCACGATTTCGTGTTTTATTCAGATCGACTTATACGCCTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTTACTGAAAAGCAAGTGGTTACTCCCACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGTAAAATTCTGATTCACCGGGATGGAGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTGGCCACAGGTAACTCTGCCAACCAAGCAATTGAATTACTCATTCAGAAAGGAGTACCAGAAAGTCACATTATATTCCTGAATCTCATCTCTGCTCCTGAGGGAATCCATTGCGTGTGCAAAAGGTTTCCTTCATTGAAGATTGTTACATCTGAGATTGACGTTGAACTAAACGAAGAGTATCGTGTTATCCCGGGATTGGGTGAATTTGGTGATCGATACTTCGGCACCGATGATTGA 1416 0.464 MPEETTSIDYVMEAANGPHFSGLRLDGRLLSSSSATAAASPTADSTPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLKPEESERVHEYNFDHPDAFDTEQLLECMGKLISGQGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVELNEEYRVIPGLGEFGDRYFGTDD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1221 471 Gene3D - 254 469 IPR029057 -
Aed9g1221 471 PANTHER URIDINE KINASE 42 468 - -
Aed9g1221 471 SUPERFAMILY PRTase-like 253 470 IPR029057 -
Aed9g1221 471 CDD UMPK 52 250 IPR000764 -
Aed9g1221 471 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 42 468 IPR029930 GO:0004849|GO:0044206
Aed9g1221 471 TIGRFAM udk: uridine kinase 49 250 IPR000764 -
Aed9g1221 471 CDD PRTases_typeI 327 442 IPR000836 -
Aed9g1221 471 PRINTS Uridine kinase signature 50 67 - -
Aed9g1221 471 PRINTS Uridine kinase signature 125 140 - -
Aed9g1221 471 PRINTS Uridine kinase signature 196 207 - -
Aed9g1221 471 PRINTS Uridine kinase signature 218 231 - -
Aed9g1221 471 PRINTS Uridine kinase signature 80 91 - -
Aed9g1221 471 PRINTS Uridine kinase signature 182 192 - -
Aed9g1221 471 ProSiteProfiles UvrC family, homology region profile. 156 239 IPR001162 GO:0009381
Aed9g1221 471 Pfam Uracil phosphoribosyltransferase 268 469 - -
Aed9g1221 471 Pfam Phosphoribulokinase / Uridine kinase family 52 238 IPR006083 GO:0005524|GO:0016301
Aed9g1221 471 Gene3D - 46 253 IPR027417 -
Aed9g1221 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 243 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1221 Aed-Chr9 9511279 9518211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1221 1 471 PRT Gene Family AT5G40870 84.886 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1221 K00876 - gmx:100786137 876.7