Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1212 GTTCTTGAAAAAAGAGTCATTTTTTCATTTTCGCGCCCTCGAACTTTCCTTCCCTCCCTCTCATGCCCAAAAACTGTACCCTCTGCCAAACCCTCGAGCTTTCCTTCACCCTCGCCAGAATCAATATCGTGCGTCGCCGCCGCCTCTGCCTCTGCCACAGCCGTAATCTCAGCGACGGCGCTTCCATTACACTGTGGTGAGTTTTCCTTCACTCCCGCCACCACCGCCGTCCTACGACTGTGCCGACGCCTCCGCCACTCCGCCATTGCCCTGATCTCCGTGACGGCGCTTCTGGTTCACTTCGTTCAAATTGAAAGAGACAAGATGGCTGGGCAATCAAACCACGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTTATTGCTGAGGATGAGATCGTGGACATTGTACCCAATCTCAAAATGGGTCCTCTCAATTTCATTTCTGGAGATTTTGGTCCGTTTACGCCACAGATTGTTACACAAGTACCGCTGTGGTTGGCCATTGCTCTGAAGAAGAGAGGAAAGTGCTCCATTCGCCCTCCCCAATGGATGTCTGTTGAGAAGTTGAGTCAAGTTTTGGAGGCAGAGCGAGACTCTCAAGAGATGTCAGATCAATTGCCATTTCATTACGTGGAAATCTCAAGACTTCTTTTTGATCATTCACGTGACAACATTTCTGACGTATATATGGTGAGGTCTCTAATTGAGGACATCAGAAATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAAGCATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTATCTGCAATGGAAGTGAATATTGTTCGTCCATTTATTGGAAGAGCCTTACAAGCATTTTATAAACATGATAGTCCAGAGTTGATACCAGACCCAGAGAGAGTTTCTGACAGGCGCCCCCAAGTTGTCAACAATGCCCCAAGAAGACAACTACGAAGATAG 957 0.4639 VLEKRVIFSFSRPRTFLPSLSCPKTVPSAKPSSFPSPSPESISCVAAASASATAVISATALPLHCGEFSFTPATTAVLRLCRRLRHSAIALISVTALLVHFVQIERDKMAGQSNHELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFTPQIVTQVPLWLAIALKKRGKCSIRPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHSRDNISDVYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVSDRRPQVVNNAPRRQLRR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1212 318 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 109 301 IPR007257 GO:0005634|GO:0006260
Aed9g1212 318 SUPERFAMILY PriA/YqbF domain 120 179 - -
Aed9g1212 318 CDD GINS_A_psf2 174 290 - -
Aed9g1212 318 Gene3D - 120 185 - -
Aed9g1212 318 SUPERFAMILY GINS helical bundle-like 181 289 IPR036224 -
Aed9g1212 318 Gene3D - 186 293 - -
Aed9g1212 318 MobiDBLite consensus disorder prediction 296 318 - -
Aed9g1212 318 Pfam GINS complex protein 161 270 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1212 109 255 Core DNA Replication Machinery Family AT3G12530 67.347 8.94e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1212 K10733 - gmx:100780528 397.512