Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1195 ATGGCAATGGAAGTGGAGCAGAATCTGAATAATCAGCAATTAGGGTTTCCCTTCTGGAATCCGCTTCGTCGCAGGTTCGGACCCGAATCTCCTTTCTTCGCCCCCGGCAACCTCGAACGGGAACTTCTTGCCAAACAGGTTGCTTTGGAATTGACAGAAGAGAAGCAACAGCTTGAGAAATGGATGCAACTAGAGGAAGAAGGAAGGGAAGTCTTTTGTCCCATGGTTGGTTGCGGTGCACGCTTGACTTCAATGGAGGACTTTGAAAATCACTATAATGCAAGGCATACTGCATCCTGCTCTGTGTGCTCCAGAGTCTACCCGACGTCTCGGTTGCTCAGCATACATGTATCTGAAGTGCATGATTCTTTCTTTCAAGCAAAAGTTGCTCGTGGTTACGATATGTATGAATGCTTGGTGGAAAGGTGTGGCTTGAAATTCAAGAGCTACAATAGTAGGCAGCGGCATCTGGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTACAAGAAGGCTAAGGCTTCAAAGAAACAGAGGTTGAAGTCCCTACGCAAACAAGCTGTTCGTAAGGAGGAGGATGCTTCAGGAATGATGGAAGTAGAAAATGCGGCCATGGATGACCTTGTTTCAGCAGTCTCTAAATTGAGCACTTCTGACTCCACCCCTTCATCTGTTAGCTTTGGTCGCCGCCACAAAGGCTTGTCATTCGTACCTCGAGCTGTTCAGCGTGGAGGTGGATCAAAGTCATCAAATACAGAAGCATCCACGACAAAGAGATAA 783 0.4674 MAMEVEQNLNNQQLGFPFWNPLRRRFGPESPFFAPGNLERELLAKQVALELTEEKQQLEKWMQLEEEGREVFCPMVGCGARLTSMEDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDMYECLVERCGLKFKSYNSRQRHLVDKHKFPTSFEFYKKAKASKKQRLKSLRKQAVRKEEDASGMMEVENAAMDDLVSAVSKLSTSDSTPSSVSFGRRHKGLSFVPRAVQRGGGSKSSNTEASTTKR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1195 260 Coils Coil 167 194 - -
Aed9g1195 260 MobiDBLite consensus disorder prediction 245 260 - -
Aed9g1195 260 MobiDBLite consensus disorder prediction 217 260 - -
Aed9g1195 260 ProSitePatterns Zinc finger C2H2 type domain signature. 100 121 IPR013087 -
Aed9g1195 260 SMART c2h2final6 136 161 IPR013087 -
Aed9g1195 260 SMART c2h2final6 71 96 IPR013087 -
Aed9g1195 260 SMART c2h2final6 98 121 IPR013087 -
Aed9g1195 260 ProSitePatterns Zinc finger C2H2 type domain signature. 73 96 IPR013087 -
Aed9g1195 260 PANTHER UNCHARACTERIZED 12 244 IPR039258 -
Aed9g1195 260 Gene3D Classic Zinc Finger 43 125 - -
Aed9g1195 260 PANTHER ZINC FINGER PROTEIN 511 12 244 - -
Aed9g1195 260 ProSitePatterns Zinc finger C2H2 type domain signature. 138 161 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1195 13 257 C2H2 Transcription Factor Family AT5G14140 64.706 6.39e-116 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed9g1195 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1195 - - gmx:100819557 431.409