Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1194 ATGATGAGGATAGTGTTAATGGCTTTGTTGATGGCTTTCTTCATATCTAAGGGTGGAGGCCAATTGGTAGAGAATTTCTATGGTTCGTCTTGTCCAAACTTGGAATCCATCGTCAACCAAGCTGTCACTACCAAGTTTACTCAGACCCTCACAACTGGACAAGCTACTCTTCGTCTCTTTTTCCATGATTGCTTTGTTGAGGATGCGGAGGAAAATATTTCACTACCTGGAGATGGGTTTGACACTGTGATTAAGGCAAAGCAAGCAGTGGAATCTTCATGCCCTGGAGTGGTTTCATGTGCTGACATTTTGGCACTTGCTACCAGAGACGTTATAGGCTTGCTTGGACGCAGAGACGGGCTTATTTCCAAAGCATCCCGCGTGGAAGGAAACCTTCCAAAAGCAAACTTCAACTTAGACCAACTCAACGCGCTTTTCGCAAACCACGGTCTTACCCAAACGGACATGATAGCTCTCTCCGGGGCCCACACCGTCGGGTTCTCCCACTGCGACCAGTTCACAAACCGTTTATATTCCTTCACGCCCTCGAACCCAGTGGACCCCACTCTTGACCCCACCTACGCGCAGGAGCTCATGGCCGGGTGCCCTCGGAACCCCGATCCCACCATAGCGATCGCGCTGGACCCGCAATCCTCTGCGGCGTTCGACAACGTCTATTACCAGAATCTGCTCTCCGGGAAGGGGCTGCTCACCTCCGACCAGGTGCTGTTCGACGACGCCGCGTCGCAGCCCACGGTGGTGAGGTTCGCGAACAGCGCCGCGGACTTCAACGAGGCGTTCGTCGCCGCCATCAGGAAGCTCGGGAGGGTCGGCGTCAAGACGGGGAGCGACGGAGAGATTCGGAGAGATTGCACAGCGTTCAATAGTTAA 891 0.5354 MMRIVLMALLMAFFISKGGGQLVENFYGSSCPNLESIVNQAVTTKFTQTLTTGQATLRLFFHDCFVEDAEENISLPGDGFDTVIKAKQAVESSCPGVVSCADILALATRDVIGLLGRRDGLISKASRVEGNLPKANFNLDQLNALFANHGLTQTDMIALSGAHTVGFSHCDQFTNRLYSFTPSNPVDPTLDPTYAQELMAGCPRNPDPTIAIALDPQSSAAFDNVYYQNLLSGKGLLTSDQVLFDDAASQPTVVRFANSAADFNEAFVAAIRKLGRVGVKTGSDGEIRRDCTAFNS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1194 296 PANTHER - 5 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 Gene3D - 72 295 - -
Aed9g1194 296 ProSiteProfiles Plant heme peroxidase family profile. 21 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 CDD secretory_peroxidase 21 294 IPR033905 GO:0004601|GO:0042744
Aed9g1194 296 Pfam Peroxidase 39 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Aed9g1194 296 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Aed9g1194 296 Gene3D - 26 69 - -
Aed9g1194 296 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Haem peroxidase superfamily signature 98 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 Gene3D Peroxidase, domain 2 133 274 - -
Aed9g1194 296 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Plant peroxidase signature 213 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Plant peroxidase signature 269 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Plant peroxidase signature 229 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g1194 296 PANTHER PEROXIDASE 5 296 - -
Aed9g1194 296 SUPERFAMILY Heme-dependent peroxidases 21 295 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1194 Aed-Chr9 9206292 9209742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1194 2 295 Peroxidase AT5G14130 56.875 1.66e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1194 K00430 - gmx:100791275 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1194 9 9206292 9209742 Aed9g1194 9 9206292 9209742 ECH