Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1165 ATGGAAATGACTACCAATGATAATCAAAACGGTGGTAATTTCCAACTTGGTGTGAAGCTAAGTGAGCCAACTCTGGTTCCTCCTGCTGAAGAAACAAACAAGGGTTTGTATTTCCTATCCAATCTTGACCAGAACATTGCAGTGATTGTTAGAACCGTTTACTGCTTCAAAACTGCTGAGAGGGGGAATGAGAAGGTTGGGGAAGTGATCAAGAATGCACTGAGGAAGGTACTTGTCCACTATTACCCTCTTGCTGGGAGGCTCACAATAAGCTCAGAGGGTAAGCTCATAGTGGATTGCACAGGGGAGGGTGCTTTGTATGTTGAGGCTGAAGCTAACTGTTCCATGGAGGAGATTGGTGACATCACAAAGCCAGACCCTGGTACTCTTGATAGAAAGGAAGAGAGAGAGAGAGGAAAAAATAACATAAGAGAGAAAATAATAGATGTTATGAAAAACAAAGAGAAAGATAACAAGAAAAATTTGGTGGAAGTGAGATGGAAAAGAAGCTTTAATGTGACAAAGTTCAAATGTGGAGGCTTTGCTCTAGGGCTGTGCATGAACCACTGCATGTTTGATGGAATTGGTGCCATGGAGTTTGTGAACTCCTGGGGAGAAGTAGCCAGAGACTTGCCACTCTCAATCCCCCAGATCATACTCAAGGCAAGAAACCCACCAAAGATAGAGCACCTTCACCAAGAATTTGCTGACATTGAAGACAAGTCCAACACCATTAACAGGCTAAAGCTGCTGAAGATGAAAGCCATGGGAGAAGATAGTGAACTTGAGAAATGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGAACAAGGGCACTAAAGATGCTTCCAGAGCAAGAAACAAAGCTTCTCTTTGCTGTAGATGGTAGGGCCAAGTTCAACCCCCCTCTCCCAAAAGGGTACTTTGGGAATGGAATCGTGCTAACAAACTCAGTGTGCAAAGCTGGTGAGCTAACAGAAAAGCCCTTCTCATTTGGTGTGAGGCTGATCCAAGATGCAATCAAGATGGTCTCAGACAGTTACATGAGATCAGCAATTGATTACTTTGAAGTCACTAGGGCAAGGCCTTCTCTTGCTTGCACCCTTCTCATCACAACTTGGTCTAGGCTTTCTTTTCACACCACTGATTTTGGTTGGGGTGAGCCTCTTCTGTCAGGGCCAGTGTCACTGCCTGAGAAGGAAGTGATTCTGTTCCTCTCTCATGGCCAAGAGAGGAGGAACATCAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATTTTCCAAGATTTGATGCTGCAGATATGA 1320 0.4432 MEMTTNDNQNGGNFQLGVKLSEPTLVPPAEETNKGLYFLSNLDQNIAVIVRTVYCFKTAERGNEKVGEVIKNALRKVLVHYYPLAGRLTISSEGKLIVDCTGEGALYVEAEANCSMEEIGDITKPDPGTLDRKEERERGKNNIREKIIDVMKNKEKDNKKNLVEVRWKRSFNVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVARDLPLSIPQIILKARNPPKIEHLHQEFADIEDKSNTINRLKLLKMKAMGEDSELEKCTTFEVLSAFVWIARTRALKMLPEQETKLLFAVDGRAKFNPPLPKGYFGNGIVLTNSVCKAGELTEKPFSFGVRLIQDAIKMVSDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPLLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMLQI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1165 439 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 17 437 - -
Aed9g1165 439 Gene3D - 17 237 IPR023213 -
Aed9g1165 439 Pfam Transferase family 18 434 - -
Aed9g1165 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 437 - -
Aed9g1165 439 Gene3D - 238 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1165 Aed-Chr9 8799792 8802070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1165 18 439 Monolignol Biosynthesis Gene Families AT5G48930 31.788 7.58e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1165 K15400 - gmx:100804504 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1165 9 8799792 8802070 Aed9g1165 9 8799792 8802070 ECH