Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1161 ATGATGAATTCATTGTGTGGAAGCTCAGTGTCCCTAAAGAGTGAGAGCAACACTAACACTAGTAGAACCAAACTCCAACCCCAACCCACCACTTCTTCAAATGACTCAGTTGTTCAATCCAAGAAAAACAATGCCACTCAATCTTCTGTTGATATACTAATAGACCAAAGTAGCCTAACCCCACAAAGCCTAAACCTTCCTTCACTCAAATTTGACCTTGATGGAGATGTGGAAGTTCAATCACCAGATAGTACGATGTGGGAGTCCTTTTTTGCAGACCATTTAGATGCTGATTTCATGATCTCTTCCCCAGTGAGAAATGTTTCTTCTTCACCACAAGGATCTTCCTACAACTACAACTATGGCCAGAGCCTCTCTGGTTGTTCCCCACCTCGGTTCTCATCAACATCATCATCATCACAAATTGGAGCCTTCAACAGCAGCCACAATCACAAAGGGAAAGGACTCAGCCCCCTCCATAGGGTGTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAGAACCTCTCACTGCCTGCAATAGAGGAGTTCTTGGAGGAATACCAAGGCTATTCTTCTTCATCAACCAAGGTGGTTGTGTCTTCTTCTGACAATAACAGCATTGCCACAAGTTCTTCTCATGAATGCTTTGATCATCACCTGTCAACTACTCAAATCCTCCCATCCTCCATGTTGGATAGCTTGCCACTGCATAATTCTTCGAGGTACCATCATGGATCGGTTGATGATGAATCTTCGGTGCACGGTGGCGGCGGCGGTGGATCTTCTCAGTTGTCTCAGGAGAGTGACATCTATCACCAGATGGGGTCCATGGCTAACAGCGGGCTTCAACTGGTGCACCTGCTCCTGGCCTGCGCGGAGGCGGTGGCGAAAGAGGAATACATGCTGGCGAGAAGGTACCTCCACCACCTGAACCGCGTCGTGACGCCCTTAGGCGACTCCATGCAGCGCGTGGCGGCGTGCTTCACCGACTCCCTAAGCGCGAGGCTGAACAACTCCACCCTCACAGCTCCAAAACCCTCAAAACCACTAACCCCCTCCAACTCCCTCGAAGTCCTCAAAATCTACCAGATCGTCTACCAGGCCTGCCCCTACGTCAAGTTCGCCCACTTCACCGCCAACCAGGCCATCTTCGAGGCCTTCGAGACCGAGGAGCGCGTCCACGTCATCGACCTCGACATCCTCCAGGGCTACCAGTGGCCCGCCTTCATGCAGGCGCTCGCGGCGCGTCCGGCGGGCGCGCCGTTCCTCCGCATAACAGGAGTGGGCCCCTCGCTAGACGCTGTCCGGGAGACCGGACGGTGTCTCACGGAGCTGGCCCACTCCCTGCGGATCCCCTTCGAGTTCCATCCCGTTGGGGAGCAGCTCGAGGACCTCAAGCCGCACATGCTGAACCGCCGCGTCGGGGAGGCGCTGGCAGTTAACGCGGTTAACCGCCTGCACCGTGTCCCCGGCAGCAGCCAGCTGGGGAATTTACTGACCATGCTGCGGGACCAGGCGCCGAACATAGTTACTCTAGTGGAGCAAGAAGCGAGCCACAACGGACCCTACTTTCTGGGGCGTTTTCTGGAAGCCTTGCATTACTACTCCGCGATCTTCGACTCGCTGGATGCGACGTTTCCGGCGGAGTCGGCGCAGAGGGCGAAGGTGGAGCAATACATATTCGCGCCGGAGATAAGGAACATAGTGGCGTGTGAGGGGGTGGAGAGGTTCGAGAGGCACGAGAGGTTGGAGAAGTGGAGGAAGATAATGGAGGGGAAGGGGTTCAAAGGGGTAGCGCTGAGTCCGAACGCGGTGACTCAGTCGAAGATACTGTTGGGGCTGTACTCGTGTGAGGGGTATAGGTTGACGGAGGATAAAGGGTGCTTGTTGCTTGGGTGGCAAGATAGGGCCATCATTGCTGCGTCTGCATGGCGGTGTTGA 1947 0.5429 MMNSLCGSSVSLKSESNTNTSRTKLQPQPTTSSNDSVVQSKKNNATQSSVDILIDQSSLTPQSLNLPSLKFDLDGDVEVQSPDSTMWESFFADHLDADFMISSPVRNVSSSPQGSSYNYNYGQSLSGCSPPRFSSTSSSSQIGAFNSSHNHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEEYQGYSSSSTKVVVSSSDNNSIATSSSHECFDHHLSTTQILPSSMLDSLPLHNSSRYHHGSVDDESSVHGGGGGGSSQLSQESDIYHQMGSMANSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNNSTLTAPKPSKPLTPSNSLEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGPSLDAVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMLNRRVGEALAVNAVNRLHRVPGSSQLGNLLTMLRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPAESAQRAKVEQYIFAPEIRNIVACEGVERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIIAASAWRC 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1161 648 MobiDBLite consensus disorder prediction 243 267 - -
Aed9g1161 648 Pfam GRAS domain family 286 647 IPR005202 -
Aed9g1161 648 ProSiteProfiles GRAS family profile. 277 647 IPR005202 -
Aed9g1161 648 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 646 IPR005202 -
Aed9g1161 648 MobiDBLite consensus disorder prediction 1 44 - -
Aed9g1161 648 PANTHER GRAS FAMILY PROTEIN RAM1 40 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1161 Aed-Chr9 8766943 8769238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1161 293 646 GRAS Transcription Factor Family AT3G54220 46.499 5.71e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g1161 GRAS 1.2e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1161 - - gmx:100775374 1018.45