Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1156 ATGAAGAAGTTGATGACGGTGCCACCGCCGAAGCGGAACCGTCTGGAGGAGGAAGTAGAAGAGAAGAAAAAAGAAGTCGGTTCTACTCCGCAGATCCTGGAGAAAAATTTAGAGGAGATTGACCAATTTCTCGCGACTCTGCATCAGAAAAACTATGGAAACGCGAAGAAGAACTTTGAGATTCCTGGCTTTGTTGAGAAGTACTTGGATCTATTGGAAGAGAAGACAGCGGAAGGCAAAGCAAAATGGGGAGAGGTGCCGCAGGAAGATTCGTGGTTGATTGAAACCGCGGATCGGATTTCGAAGCTGATGCTTTTTCTTACCGATCATCATCATCATCATCATGTTGAACACGGTAAAGAGTTCAACGGTGGGAAAAACTCGCTGTTGAATCGTGTCACCACGATTCACGAGCGTGTGATGTCGCATTTGGAGGAGGACTTCCGTTTTCTGATGGAAGATTCTAGAGCACCAACGGAATCGGATCCCGGAGGCGGCAATTATAGCAATAGTAACAGCAATCAGAACAATGTCGACGCCAAAGAGGTGCAAGATCAAGAAGCTGAAAATGATATAAATTTCCCCGGTTACTCCGAGGAGGCCATTGCCAATCTGAGCAAGATCGCCGGCGAGATGCTATCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATGTCACGGAGGATCGCGTTCGAGGAGATTCACAAGAAGCTAGGGCTAGAGAAGATCAGCATCGACGACATGATTATGAAGGTGCCGTGGGAGACTCTCGCCAGGGACATGGTCCCGGCCTGGATCAACACGCTAAAGCAGTGCGCGGCGGTGTATTTCCCCGGCGAGCGGAGGCTCGCCGAGTCCGTGTTCGTCAATAGCCCCACGGTTTCCGCGGGGCTATTCAGCAGCCTCTCCCGCGGCGTGGTGATCCAGCTCCTCAACTTTGCGGAGGCTGCGGCGCTGACGAAGCGCGCCGCGGAGAAGCTTTTCAAGCTCCTCGACATGTACGAGACCCTCCGGGACGTGATCCCGAAGGTGGACGGGTTTTTCCCGGAGGAGTGCGTCAAGGAGCTGAAGTCGGAGATGACGCTCGCCAAGTCGCGCCTTGGCGAGTCCGCCATCTCCATCTTCTGCGACATCGAGAACCAGATCAAGTCGGAGACAGCGAAAACCGCGGTCCCGGGAGGAGCGGTGCACCCCCTCACGCGCTACATAATGAACTACCTCAGCGTGGCGGGGGACTACAAAGAAACACTGGAGCAAGTCTTCAAGGAACATTCCAAGATGGAGCGTGCCGACTCCACCAGCAAGCCTGCACCGCAGTCCTCGTCCTCGTCATCGTCGTCGATCTCGCCGTTCGCGGGGCAGGTGCTGAGGGTGATGGATCTTCTAGACTCGAGCCTGGAGGGAAAAGCGCGTTTATACAAATCAGACGTGGCCCTGAGCAACTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAAGTAAAAGGATCAAGCGAGACGAGCCAGGTGATGGGTGACACGTGGATAAGAAAGAAGTCATCGGAGCTGAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAACAGGGTTCTGGCGTGTCTGAACCCGGAGGGGCTGAACGTGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACACGCTGTTCGACGAGATACACAAGGCGCAGAGCACGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATATCCGGAGTGGTGGTTCCGGCGTACAGAGCATTCATTGGGAGATTCGCGCAGATATTTAACACGGGAAGACAAACTGAGAAGTACATAAAGTACCAACCTGATGACATTGAAAATTACATTGATGAATTGTTTGATGGGAAGCCACACCAGTCCATTGCTAGGAGGCCGAGAACATAA 1947 0.53 MKKLMTVPPPKRNRLEEEVEEKKKEVGSTPQILEKNLEEIDQFLATLHQKNYGNAKKNFEIPGFVEKYLDLLEEKTAEGKAKWGEVPQEDSWLIETADRISKLMLFLTDHHHHHHVEHGKEFNGGKNSLLNRVTTIHERVMSHLEEDFRFLMEDSRAPTESDPGGGNYSNSNSNQNNVDAKEVQDQEAENDINFPGYSEEAIANLSKIAGEMLSGGYESECCQVYIMSRRIAFEEIHKKLGLEKISIDDMIMKVPWETLARDMVPAWINTLKQCAAVYFPGERRLAESVFVNSPTVSAGLFSSLSRGVVIQLLNFAEAAALTKRAAEKLFKLLDMYETLRDVIPKVDGFFPEECVKELKSEMTLAKSRLGESAISIFCDIENQIKSETAKTAVPGGAVHPLTRYIMNYLSVAGDYKETLEQVFKEHSKMERADSTSKPAPQSSSSSSSSISPFAGQVLRVMDLLDSSLEGKARLYKSDVALSNFFMMNNGRYILQKVKGSSETSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLACLNPEGLNVNGKVHKPVLKERFKSFNTLFDEIHKAQSTWVVKDEQLQSELRVSISGVVVPAYRAFIGRFAQIFNTGRQTEKYIKYQPDDIENYIDELFDGKPHQSIARRPRT 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1156 648 MobiDBLite consensus disorder prediction 434 450 - -
Aed9g1156 648 Pfam Exo70 exocyst complex subunit 266 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed9g1156 648 MobiDBLite consensus disorder prediction 9 28 - -
Aed9g1156 648 MobiDBLite consensus disorder prediction 162 178 - -
Aed9g1156 648 MobiDBLite consensus disorder prediction 155 178 - -
Aed9g1156 648 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 24 642 - -
Aed9g1156 648 SUPERFAMILY Cullin repeat-like 94 635 IPR016159 -
Aed9g1156 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 642 IPR004140 GO:0000145|GO:0006887
Aed9g1156 648 MobiDBLite consensus disorder prediction 426 450 - -
Aed9g1156 648 Gene3D Exocyst complex component Exo70 75 644 - -
Aed9g1156 648 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1156 Aed-Chr9 8712821 8714793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1156 31 645 EXO70 exocyst subunit family AT5G13990 48.998 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1156 K07195 - gmx:100820172 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1156 9 8712821 8714793 Aed7g0926 7 6997667 6999901 PCT