Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1149 ATGGGTAGCTGCCCTTGTTTTGGGTTGAGGAGCTGGAAGGCCAAAGGGAAATGCGACGTCGTCAAGGTTCAGGAAGAACACAACAAGAATCGCAAATCTCTCGACAACAATAACAACAATCTCTCTGAAGCTTCTTCAGGACATAGACAAGAAGAAAACCCGACAGAGGAGAGTGGCAATTCTGATAAGGCTCAGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAGAATTTTAGGGATGAAACCTTTATTGGGCAAGGTGGATTTGGCACTGTTTACAAGGGAACACTCAGGAAACTTAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACTGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTTCTACGCCATTCCAACCTTGTTAGTATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAGTACATGCCTTTGGGATCTTTAGAATCTCATCTTCATGATGTTTCACCTGATGAAGAACCACTTGATTGGAATACCAGAATGATGATAGCTTGTGGAGCAGCAAAAGGACTAAACTATCTGCACAATGAAGCAAAACCTTCTGTTATATACAGGGATTTGAAGCCATCCAACATACTATTGGATGAAGATTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGTCCAATTGGAGAGAAATCATATGTTGCCACTAGGGTCATGGGAACACAAGGTTATTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACAATGAGATCTGACATTTACAGTTTTGGGGTTGTGTTATTGGAACTAATTACTGGACGCAAAGCATATGATGATAACGGTGGCCCTGAAAAGCATCTTGTAGAATGGGCACGCCCAATGTTTAGAGACCACAGGAGTTATCCAAGATTGGCAGATCCACGGCTTGAAGGTCGATACCCAGGATCGGCTCTAGCGATGGCCATTGAATTGGCAGCCATGTGTCTTCGTGAAGAGCCACGTCAACGGCCTAGTGCAGTTGATATAGTGGAAGCTATAGAATTCTTGTCATCCAAGCAATATACCCCAAAAGTATCCAACACAATCAACACAACAGAGACGGAGGAGAGTGGAGAATCTCCAAAAGAAACATCTGTGATTTTGCCAAAAGTAACAGAAAGAGAGCGAGCTGTTGCAGAGGCCAAGCTGTGGGGCGAGACGTGGAGGCAGAGACGACAAAGTGAGCAAAGTAGTCCTGAAGTAAACAAATAG 1269 0.435 MGSCPCFGLRSWKAKGKCDVVKVQEEHNKNRKSLDNNNNNLSEASSGHRQEENPTEESGNSDKAQIFTFRELATATKNFRDETFIGQGGFGTVYKGTLRKLNQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVSMIGYCAEGDQRLLVYEYMPLGSLESHLHDVSPDEEPLDWNTRMMIACGAAKGLNYLHNEAKPSVIYRDLKPSNILLDEDFHPKLSDFGLAKFGPIGEKSYVATRVMGTQGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRKAYDDNGGPEKHLVEWARPMFRDHRSYPRLADPRLEGRYPGSALAMAIELAAMCLREEPRQRPSAVDIVEAIEFLSSKQYTPKVSNTINTTETEESGESPKETSVILPKVTERERAVAEAKLWGETWRQRRQSEQSSPEVNK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1149 422 Coils Coil 24 44 - -
Aed9g1149 422 Gene3D Phosphorylase Kinase; domain 1 38 155 - -
Aed9g1149 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Aed9g1149 422 MobiDBLite consensus disorder prediction 29 61 - -
Aed9g1149 422 MobiDBLite consensus disorder prediction 366 390 - -
Aed9g1149 422 CDD STKc_IRAK 85 353 - -
Aed9g1149 422 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Aed9g1149 422 PANTHER OS07G0668900 PROTEIN 19 377 - -
Aed9g1149 422 SMART serkin_6 79 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1149 422 SUPERFAMILY Protein kinase-like (PK-like) 65 369 IPR011009 -
Aed9g1149 422 ProSiteProfiles Protein kinase domain profile. 79 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1149 422 MobiDBLite consensus disorder prediction 34 48 - -
Aed9g1149 422 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
Aed9g1149 422 PANTHER OS07G0668900 PROTEIN 19 377 - -
Aed9g1149 422 Pfam Protein kinase domain 80 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1149 Aed-Chr9 8664349 8669788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1149 35 417 Glycoside Hydrolase AT3G07070 55.039 2.28e-143 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed9g1149 Pkinase 6.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1149 K13430 - gmx:100805675 687.952