Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1137 ATGGAAGAAGTCCTAAATCCAATAGAATTACCAGTGGGGTACAGATTCGACCCCAGTGATAAAACTCTTGCTGGTTTCTACCTTAGGAAGAGGATCATAGCACAACAGCTCGTCACTAATGACATCATTGTAGACTATGATGTTTACCAAACAGTGCCTTGGGAGCTCCCAAAAGGTGATGATCAGAGGTATTTGGATTGCCAGAGGTTTTTCTTCCTTGATCTAAGGACCAAAGTGTTTGAAAACATTGATAAGAGAGTTGCAGGAAATGGCGAATGGAGAACAATTGTGAGAGACCAAGAGGTTGATCTTTCTGGCGAACAGATTTTTGCGAAAATGAACATTTTGGGTTTCTGGGAAGCCAATGGCAACAACAATGATTTTGCCGAAACAAATTGGGTCATGCATGAGTTTCGCCTTGCCTCTAGATCAAATCCATCCGTGTTGTCAGATGTGGCTGTGTACCGCATAATAAGGTCTGAAGTGGAGAACTCTATCAGCAGCAGTGATGAAGAAGAAGTTGAATTTGAAGAAGCTTTTGATGACTCACCAACTGTCATTGATTTCAATGTGGAGGAGAGTGGCACTGTCACTGGTCCTCCCTCTCCAGCTACCAGCTGTGAAACATCCTAA 633 0.4297 MEEVLNPIELPVGYRFDPSDKTLAGFYLRKRIIAQQLVTNDIIVDYDVYQTVPWELPKGDDQRYLDCQRFFFLDLRTKVFENIDKRVAGNGEWRTIVRDQEVDLSGEQIFAKMNILGFWEANGNNNDFAETNWVMHEFRLASRSNPSVLSDVAVYRIIRSEVENSISSSDEEEVEFEEAFDDSPTVIDFNVEESGTVTGPPSPATSCETS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1137 210 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 164 - -
Aed9g1137 210 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Aed9g1137 210 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
Aed9g1137 210 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Aed9g1137 210 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 164 - -
Aed9g1137 210 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1137 Aed-Chr9 8516681 8517811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1137 5 177 NAC Transcription Factor Family AT3G17730 29.050 1.81e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed9g1137 NAM 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1137 - - gmx:100305869 229.95