Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1132 ATGGCAGACCCAACAGCTATTTATGAGTTTTTGAAGCAGCCCTCAAGCGGTGGTGCAAAGAGAGCAGCACCGCCTCCGCCGCCACCTTCCGCCAGCAGCACCACCCGCACCTTCCAATGCCACTTCTGCCACCGCAAGTTCTACACCTCCCAAGCCCTCGGAGGGCACCAGAACGCCCACAAGCTTGAGCGCGCTGCCGCGAGGAGATCATCCATGAGCACCACCGCCAACGGGCCTCTCCCGATGGCCCTGCAGGAGCCCAACCTGAAGCCCAGTTTCAGCGAGCTCCCCAGGCCCAGGCCTATGATGGAGCCCAGCGAGGTGTTTTTCCACCACCCTCCTTACTGGGTCGATGTGGAGCCCTTGCATCAGTACCATGCTACTCTCCCACCTCTTTCTTCTTTCCACGCTGCTGCACCTTCTTCCACTTCAACACCTCAGCAACAACAACAACTTGTTCTTTCCTCACACAACAACGTTGACGCTGTTTCTTCTTCCGACCACGTCAACCTCGACCTTACCCTCCGCTTGATTGGTGAGAAAGGAATTTATGATGTGAGTTGTCGATTCATCAACATGTTTTCCTTTTGA 591 0.5567 MADPTAIYEFLKQPSSGGAKRAAPPPPPPSASSTTRTFQCHFCHRKFYTSQALGGHQNAHKLERAAARRSSMSTTANGPLPMALQEPNLKPSFSELPRPRPMMEPSEVFFHHPPYWVDVEPLHQYHATLPPLSSFHAAAPSSTSTPQQQQQLVLSSHNNVDAVSSSDHVNLDLTLRLIGEKGIYDVSCRFINMFSF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1132 196 MobiDBLite consensus disorder prediction 1 35 - -
Aed9g1132 196 PANTHER ZINC FINGER PROTEIN JAGGED 23 177 IPR045320 GO:0003700
Aed9g1132 196 PANTHER OS02G0182300 PROTEIN 23 177 - -
Aed9g1132 196 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Aed9g1132 196 MobiDBLite consensus disorder prediction 68 90 - -
Aed9g1132 196 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Aed9g1132 196 Gene3D Classic Zinc Finger 28 80 - -
Aed9g1132 196 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1132 Aed-Chr9 8437442 8438395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1132 33 79 C2H2 Transcription Factor Family AT5G14010 65.957 4.24e-14 65.5