Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1124 ATGTTGCTCTGCGATTACTGCGACTCCAAACCCGCCTTACTCTTCTGCAGAGCCGACTCCGCCAAGCTCTGCCTCCTATGCGACCATCACGTGCACGCCGCCAACGCCCTCTCCCTTAAGCACGTGCGCTTCCAGATTTGCGACAACTGCAAGTCCGACACCGCCGACCTCCGCTGCTCCCACCACAACCTCGTCCTCTGCCACCGCTGCGACGCCGACTCCCACGCCGAATGCTCCTCCCTCCGCCTCCGCCTCCACGCTCTCCACGGCTGCCCCTCCCTCCCTGAGATTGCCTCCGCTCTCAGCCTCGACGACCCCGCCGCCAACTTCCGCCACGAGGTCTACGACCAGGTCCTTCAAATCGCGCGCCTGAACAACAACGACGACGACGATGACATCACCGCCGCCGCAAACGATGTCGTCCCCGTCCCCGTGGCCACCGTGGACGAGATGCTGATGCAGCAGCAGCAGCAGACGCCGTTCACGTCTCTGCTCACGCTGCCGAATTCCGAATTTGAATTCGACGCCAGAAAAAGTAACGATAACCACGGTTTCCGAACCGACGCAGGGGATCTTCTCTGGAATTACAACAACCCAACAACGTATCAGCCTCCTCAGATGTGGGATTTTCAATTACAGAAATCAAGAGATTGCTGTGAACCAAGAGTGGTGACATATGATGGTCTAGAAGTTCCAAAATCATTTCAGGATGTGCTCAATATGAATTACTCCACAATTGGTGATGATATTCTGTCAATAAATAATCAATCGGATCAGTCATCATCAAGCCATGCAAGGAAGAACGAAGAGAGCAACATGAAAGCCAATGGTGGGTTATCATCAGAGTCAAAATTGTTTGAATCCATACCGTTCAGTGGCACCAACAATGTCGTAGTCATGGAGCATCTTATGGGTGGGAATGAGAATGTTAGCACCTTAAAAGCCAGGGTTAGCTTGGAAGAGTTGGCTAAGAATAGAGGGGATGCCATGTTACGCTATAAGGAGAAGAAGAAAACTCGAAGGTACGATAAGCACATTCGCTATGAATCAAGGAAGGCCAGGGCTGATACTAGAAAGAGGGTTAGAGGGAGATTTGTGAAGGCAAGTGATGTTCAAGCATGA 1122 0.5223 MLLCDYCDSKPALLFCRADSAKLCLLCDHHVHAANALSLKHVRFQICDNCKSDTADLRCSHHNLVLCHRCDADSHAECSSLRLRLHALHGCPSLPEIASALSLDDPAANFRHEVYDQVLQIARLNNNDDDDDITAAANDVVPVPVATVDEMLMQQQQQTPFTSLLTLPNSEFEFDARKSNDNHGFRTDAGDLLWNYNNPTTYQPPQMWDFQLQKSRDCCEPRVVTYDGLEVPKSFQDVLNMNYSTIGDDILSINNQSDQSSSSHARKNEESNMKANGGLSSESKLFESIPFSGTNNVVVMEHLMGGNENVSTLKARVSLEELAKNRGDAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVRGRFVKASDVQA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1124 373 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Aed9g1124 373 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 371 - -
Aed9g1124 373 MobiDBLite consensus disorder prediction 254 279 - -
Aed9g1124 373 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED 4 371 - -
Aed9g1124 373 ProSiteProfiles CCT domain profile. 326 368 IPR010402 GO:0005515
Aed9g1124 373 CDD Bbox1_BBX-like 3 46 - -
Aed9g1124 373 Pfam CCT motif 326 368 IPR010402 GO:0005515
Aed9g1124 373 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1124 Aed-Chr9 8368730 8372332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1124 1 370 C2C2-CO-like Transcription Factor Family AT2G33500 34.243 4.23e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aed9g1124 CCT 8.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1124 - - gmx:100786838 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1124 9 8368730 8372332 Aed9g1124 9 8368730 8372332 ECH