Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1111 ATGGCGAGCAGGTACTGGGCAGTGACTCTCCCCGTTCACAACTCCGCATCTCAGCTCTGGAACCAATTGCAGGAACGCATCTCCAAGCATTCCTTCGACACTCCCCTTTACAGATTCAACATCCCCAACCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCCCTCAGCGATGACCTCGCCAAGTCCAACAATTTCGTGGAAGGAGTCACGCACAAGATCAGGCGCCAGATTGAGGACCTCGAGAGAGTCTCCGGCGTCGACAGCGGCGGCCTCACCGTCGATGGCGTCCCCGTCGATTCCTACTTGACCAGGTTCGTTTGGGATGAGGCCAAGTACCCGACCATGTCGTCTTTGAAGGAGATCGTCGATGGCATTCACAGTCAAGTTCGTGTTTCTGAGTACAACAATATCCGCAGCCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCAGTCCGTGATATTTCCAACTTGGTAAAACCTGAGGACATTGTAGCTTCAGAACATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGAGTGGCTCTCGAGCTATGAAACATTGACAGATTATGTGGTCCCCAGGTCTTCAAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTCACACTCTTCAGTCGTGTTGCAGATAATTTTAGAACTAGTGCACGGGAAAAAGGGTTCCAAATTCGTGACTTTGAATACAGTCAAGAAACACATGAGAACCGAAAGCAGGAGTTAGATAAATTGGTGCAAGATCAGGAAAGATTGAGGTCTTCTCTGTTGCAATGGTGCTATACCAGTTATGGAGAGGTTTTCAGTTCCTGGATGCACTTTTCTGCTGTGCGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTTTTAGCTCCTTCGGTAAAATCTGAGAAGAAAGTGCGATCTATCATTGAAGGTGCATACTGGAAGGGTGAAGATGAAGTAGGTGCTGGGATGGCTGGGCTAGCAGGGGATGGTGATGCCCACCCCTATGTCTCTTTCACTATCAATCTTGCTTGA 1083 0.4783 MASRYWAVTLPVHNSASQLWNQLQERISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNNFVEGVTHKIRRQIEDLERVSGVDSGGLTVDGVPVDSYLTRFVWDEAKYPTMSSLKEIVDGIHSQVRVSEYNNIRSQLNAINRKQTGSLAVRDISNLVKPEDIVASEHLTTLLAIVSKYSQKEWLSSYETLTDYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEYSQETHENRKQELDKLVQDQERLRSSLLQWCYTSYGEVFSSWMHFSAVRLFAESILRYGLPPSFLACVLAPSVKSEKKVRSIIEGAYWKGEDEVGAGMAGLAGDGDAHPYVSFTINLA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1111 360 Gene3D - 41 303 - -
Aed9g1111 360 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 360 - -
Aed9g1111 360 Pfam V-ATPase subunit C 5 333 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed9g1111 360 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 360 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed9g1111 360 Coils Coil 245 265 - -
Aed9g1111 360 CDD V-ATPase_C 5 357 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed9g1111 360 SUPERFAMILY Vacuolar ATP synthase subunit C 2 359 IPR036132 GO:0015078|GO:0033180|GO:1902600
Aed9g1111 360 Gene3D - 154 242 - -
Aed9g1111 360 Gene3D Vacuolar atp synthase subunit c; domain 1 11 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1111 Aed-Chr9 8251253 8256253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1111 1 360 Primary Pumps ATPases(2) AT1G12840 78.723 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1111 K02148 - gmx:100813963 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1111 9 8251253 8256253 Aed9g1111 9 8251253 8256253 ECH