Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1103 ATGGAGCGTTACACGCTACCTGCACCGCCCAATATCATTCCCGAGGAAGACGCGGCACCACCGTCGTGGGCCTGCAGGCCCAATTCCGAAGAAGAAGAAAACCACAACAACAACATTGCCATTGCCATGATGGGTGCTCCTCTCATCCCTTCCTTTAAATCCATGCTTCAACCTCAACAAGACTCTTACTTCAACTTCAACTTTAACAACTCCAACAATATTCCTTTTGTTCCTAGCATGGACTCTTTTCCCTCTCTTGACCCTTTCTCACCTTCACTTTCATCACTTCCTTTCTTCAATACCAACAACAACATGCCGCCTTTCGACCCATGTTTTGACATGGGCGGCCTGGACACATCCAGCCTTCCTCCAGCTCTCTTTTCCCAGGCCCACATGACGGGCTTCGAGCTCTCCTCGGAACTCGAGGCCCTCGCTGGACCTGGGAATGGGAATCCCGCCTTCGCCTTTGCTCCGTCGCTCGATGGGGCGAAGGACAAGGCGGAAACTCTGCGACCTTCTTCTCTCGAGGGGCCGCAGACGCTGTACCGAAAGCGGAGGGGGACGGCTGCTGCGGAGATTCCGGGGCTGGAGACTGTGAGGAGCAAGGGGAGGAAGTGGGAGGAAGGAGGTGGAATGGAGGGGGAGGAAGGAGGGAGCAGTGCTGACGTGGATGGTGGTTCCGGGCTGAACTACGAGTCCGATGAGCTGAATGAGGATAGTAACAACAATGGTTTGAAGCAGAGTGAGAGTAATGGCGGCGGTGGAGACCAGAAGGGGAAGAGGAAGGGGATGCCGGCCAAGAATCTAATGGCGGAGAGGCGCCGCCGGAAGAAGCTCAATGACAGGTTGTACATGCTCAGGTCGGTTGTCCCCAAGATTAGCAAGCCGTTAACACCCACTCTGCCAACCCTCCCCTGCCGGGTCAAGGACGAGCTGTATCCTGGCACCTTGCCAAGCCCTAAGAACCAAGCTGCAAAGGTTGAGGTTAGAGTAAGGGAAGGGAGAGCTGTCAACATTCATATGTTTTGCACCCGCCGACCAGGTCTTTTGCTTTCTACCATGAGGGCTTTGGATAACCTTGGATTGGATGTACAGCAGGCTGTTATTAGCTGTTTCAATGGCTTTGCTTTAGATGTGTTCAAAGCTGAGCAATGCAGAGAAGGCCAGGATGTCCTCCCTGAGCAAATCAAAGCAGTGCTTTTGGATTCAGCTGGCTTCCATGGTATGATGTGA 1233 0.5353 MERYTLPAPPNIIPEEDAAPPSWACRPNSEEEENHNNNIAIAMMGAPLIPSFKSMLQPQQDSYFNFNFNNSNNIPFVPSMDSFPSLDPFSPSLSSLPFFNTNNNMPPFDPCFDMGGLDTSSLPPALFSQAHMTGFELSSELEALAGPGNGNPAFAFAPSLDGAKDKAETLRPSSLEGPQTLYRKRRGTAAAEIPGLETVRSKGRKWEEGGGMEGEEGGSSADVDGGSGLNYESDELNEDSNNNGLKQSESNGGGGDQKGKRKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKPLTPTLPTLPCRVKDELYPGTLPSPKNQAAKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFKAEQCREGQDVLPEQIKAVLLDSAGFHGMM 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1103 410 MobiDBLite consensus disorder prediction 233 254 - -
Aed9g1103 410 MobiDBLite consensus disorder prediction 166 274 - -
Aed9g1103 410 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 296 410 - -
Aed9g1103 410 MobiDBLite consensus disorder prediction 198 212 - -
Aed9g1103 410 PANTHER BHLH TRANSCRIPTIONAL FACTOR 296 410 - -
Aed9g1103 410 Pfam Helix-loop-helix DNA-binding domain 270 297 IPR011598 GO:0046983
Aed9g1103 410 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 161 295 - -
Aed9g1103 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 260 295 IPR036638 GO:0046983
Aed9g1103 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 312 IPR011598 GO:0046983
Aed9g1103 410 MobiDBLite consensus disorder prediction 260 274 - -
Aed9g1103 410 CDD ACT_UUR-ACR-like 339 380 - -
Aed9g1103 410 PANTHER BHLH TRANSCRIPTIONAL FACTOR 161 295 - -
Aed9g1103 410 MobiDBLite consensus disorder prediction 1 32 - -
Aed9g1103 410 Gene3D - 257 329 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1103 Aed-Chr9 8181533 8184826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1103 108 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 46.588 3.70e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed9g1103 HLH 9.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1103 - - gmx:100804797 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1103 9 8181533 8184826 Aed9g1103 9 8181533 8184826 ECH