Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1096 ATGTCCATCTTGCCCTCACAAACCCAAGCCGCATCTTCGTCTTCTTCGTCCGCGCCTTCTTCAAACCCTAATCCCCAACATGGATTCGGAATCCCTCTTCCTCAACCCTTCTCTTCTCTTTCCCCCTCAATCGACCTCTCCTTCGGATCTCTCCAGATCTCCGATAACCCAGGTTCATCGGCTTCAGCTGCTCAAGATTCTGGTGGATCTTCCGAGAAGGTGATAAAAGTAGGGTCTCCAAGTGGAGTAATGGTTTCACCTCAGCAAAACTCTAGAACACGTTCTAGGAGTCATGGAGGAAGACGGACCCAAACCGGTACTGGAACTGGAGTGGGAACAGTTTCTTATCATAGAAATCAACAGATTCCTGGGTCCGTTAATTCTCATGGAAGTGCCCCTTCTGCAGGGAGAAAAGCTCAGATGGTGAACGGGAATTACTTGCTGAATTTTCAATATGATCCGATATCCCGTACTCAACCACGGGGTCCTCCTCCTCCCCCTACAACAAGAAGGCATCGGAAGAGGAAGCCGTACAACAAAGATTTGTTTTTGCAGGCGAATTACAAGTTCATGGTACTAGATTCAGGTGATTATTCACCTGAGTCATTGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACATATTTGACCCCCTTTTCAGTTCAGTGTCCAATTTGTTTGGAGTATCCCCTGTGTCCGCAGATAACCTCATGTGGACATATTTTCTGTTTCCCATGTATTCTACAGTACTTATTGATGGGTGAAGAGGATCAGAAAGGTGATAGCTGGAAAAGGTGTCCTTTGTGCTTTGTGATGATATCTGCCAAGGATTTATATACACTGCACATCACAAATGTCAAACAGTATCGAGTAGGAGATAATGTTGAGTTCACTTTTTTAACGCGGAAAAGGGATTCCTTCACTCTGTCACTAAAAAATAAACAAGAGACTAATATCACATCACATGTCAATGGAGATATCTGTGATCCTTTTTCTAAGTTCACTCTTACATCAGATGTAGATCTCGCAGTGAGACATGCAATATCCGATCTAGATGGTTGGCTAGCCAGAGCTGATTCAGGTCTTGTTGATGACCTGGGGAAGCTCCCTTACATTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAGGTATTGGAGTGAGCACAGGTCTCATGACAGTGAAAAATCTTCTAAGCTTATTGATCACGGACATCAGATACCATCATCAATTGCAAAATCTATGGATACTGATGATGAAAACTGTTCTAATGGATCAAGAACTTCCTCTTCTGATTTCCTTGATCAAAATAAGGTTATGATGTTGGATAAGTCAACTGCTGGAGCCTCTTCGGATCAAAACTTGGATGTGGAGAAAGCATTAATCGAGCAGGAAATAAATTTATCTTCTTCATATGAGGAGAAAAACGATATTCAAAGGCATTCAGATGGTGTTGTTGGAGATATTAAGGAAAATGATTCGTACAGTTTCTACCAGGCTGCTGATGGTCAGCATCTAATTCTTCATCCTCTGAACATGAAGTGTTTGCTTCACCATTATGGGAGCTATGATATGCTTCCTCATAGAATAAGTGGAAGGATTCTACAATTGGAGACAGTTACTCAGTCTGAGGCTGTGAGGAGGCGCTATCGATTCCTTAGTCATTTTCCATTAACCACAACCTTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTAGCCCCATTTATGGATGAAATCAAGAATCGTGCAAATCAGAGGAAGCTAGTTGCAAAAAAGGAACTGAAGGAAAAAATAAAGGCTGAAGCTACTGCTGCTTATTCTCTTCCCATATCAAGTTATCAGTTTACTTCTCGTGATGGTCCTCCAACATTCTCCATGGATGACTTCGAAGCTTTAGGTAATTCAACTATGTCCTCAAGTCCTCCCATAGCTGGGGAGAGAAAATCGTTCTCAAATGTTACTAGGCTTGGGTTTGCTGCTGCTCATGATTCTCCATCCTTGCAAATTCAAGAAACTAGTGGTTTGAGAAATGGGGAGGCACAATCGTACTCGAATGCTATATCAAGAGCAGAATCCAATGTAAATGCACCAAAGACAAATGAGTTGGGGAAGAAGGGAAAGAAACCAAATCGAGTTCTTCTGTCAACAGCTGGTGGTAGGCGTTATTGA 2199 0.4238 MSILPSQTQAASSSSSSAPSSNPNPQHGFGIPLPQPFSSLSPSIDLSFGSLQISDNPGSSASAAQDSGGSSEKVIKVGSPSGVMVSPQQNSRTRSRSHGGRRTQTGTGTGVGTVSYHRNQQIPGSVNSHGSAPSAGRKAQMVNGNYLLNFQYDPISRTQPRGPPPPPTTRRHRKRKPYNKDLFLQANYKFMVLDSGDYSPESLDPDKMLQWEDIICVTYLTPFSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGEEDQKGDSWKRCPLCFVMISAKDLYTLHITNVKQYRVGDNVEFTFLTRKRDSFTLSLKNKQETNITSHVNGDICDPFSKFTLTSDVDLAVRHAISDLDGWLARADSGLVDDLGKLPYICAAMQQLEQRKRYWSEHRSHDSEKSSKLIDHGHQIPSSIAKSMDTDDENCSNGSRTSSSDFLDQNKVMMLDKSTAGASSDQNLDVEKALIEQEINLSSSYEEKNDIQRHSDGVVGDIKENDSYSFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRISGRILQLETVTQSEAVRRRYRFLSHFPLTTTFQLCEVDLSEMLPPEALAPFMDEIKNRANQRKLVAKKELKEKIKAEATAAYSLPISSYQFTSRDGPPTFSMDDFEALGNSTMSSSPPIAGERKSFSNVTRLGFAAAHDSPSLQIQETSGLRNGEAQSYSNAISRAESNVNAPKTNELGKKGKKPNRVLLSTAGGRRY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1096 732 MobiDBLite consensus disorder prediction 699 732 - -
Aed9g1096 732 MobiDBLite consensus disorder prediction 82 114 - -
Aed9g1096 732 CDD RING-HC_RNF10 227 274 - -
Aed9g1096 732 MobiDBLite consensus disorder prediction 390 406 - -
Aed9g1096 732 MobiDBLite consensus disorder prediction 154 176 - -
Aed9g1096 732 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 301 IPR013083 -
Aed9g1096 732 MobiDBLite consensus disorder prediction 36 74 - -
Aed9g1096 732 PANTHER RING FINGER 10 FAMILY MEMBER 90 728 IPR039739 -
Aed9g1096 732 MobiDBLite consensus disorder prediction 1 28 - -
Aed9g1096 732 MobiDBLite consensus disorder prediction 390 436 - -
Aed9g1096 732 Pfam Zinc finger, C3HC4 type (RING finger) 227 273 IPR018957 GO:0046872
Aed9g1096 732 MobiDBLite consensus disorder prediction 1 114 - -
Aed9g1096 732 SMART ring_2 227 273 IPR001841 -
Aed9g1096 732 ProSitePatterns Zinc finger RING-type signature. 242 251 IPR017907 -
Aed9g1096 732 MobiDBLite consensus disorder prediction 414 436 - -
Aed9g1096 732 SUPERFAMILY RING/U-box 226 280 - -
Aed9g1096 732 ProSiteProfiles Zinc finger RING-type profile. 227 273 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1096 59 698 C3H Transcription Factor Family AT3G26730 51.589 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1096 - - gmx:100798764 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1096 9 8139791 8146467 Aed9g1096 9 8139791 8146467 ECH