Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1091 ATGGTTGTGCAGTCTCTGGACGCTGTTCACCAGCACCTGATGGTTTCCTCAAGGGTGGAGAAGATCTCAGAATCCAAAGTGACCATGCTGGCGAATGGTGGAAATGGAGCTCCAGCCGAGAGGAAACTTAGACAATTGGAGGTTTCAACAGCGCCGCGGAGGTCCAGTGCTCGGATTCAAGCTCTGCAGAAAGCAGAGCTGGAGCTTCGAGCGCGTAAAAAATCAAAGGTAGTTGAGGAGGAGAAAGAAAATTGCAATGGTGACGCTGCAGTGGCGAAGAAGCGAAGAAAAAGTAGTAGTAGTAGTGGTGGTGAGGAGAGTGTAGCAGTAGCTGTTTTGCCACTGAAGAAAAAGCCAACAGCCAGTTCCAAGGGTAAGGTGGAAGAAGTGAATGACAAAAGTAAGGTGGAGGCAGTGAATGGGAAGGAGGAATTGGAGAATGTGGGTGGAGTTTTGGGAGAGAAGAGTGACTTTCTTAAGGTCAAAGAGACGATAAGACTGTTTAATAAGCATTACCTTCATTTGGTTCAGGAAGAAGAAAAGAGGTGTGGAAAGGCAGATGCTGAGCGGAAAGCTGCTAAAAAGGCTTCAAAATTGAAGAAAGGTGCTCCACCTGAAGAATCAAAGAACACGGCTAAACGACCAGATTTAAAGGCCGTAAGCAAGATGATGGAAAATAATGAAATATTGCACCCTGTGAAAAGAATTGGCAACATTCCAGGTATTGAGGTTGGATATCAGTTTTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTGAATGGCATTGATTATATGGGCCAGTCCTATGCCAAAGCGTACAGCTATGAATTTCCAGTTGCTGTTGCCATTGTTTTGTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAACCTGAATGGTGATAAGCGTCAAATCCGGGATCAAAAGTTGGAGCGCGGTAACTTGGCTCTCAAGAATTGTGCGGAGCAATGTGTGTCTGTTAGAGTCATTCGTGGTCATGAATCTTCAAGCAGTTACACTGGTAAAGTATACACATATGATGGCTTGTACAAGGTTGTCAATTGTTGGGCAGAGAAGGGAATATCTGGATTTACAGTCTACAAGTTTAGACTTAGGAGGCTTGAAGAACAACCTACATTAACCACAAATCAGGTATATTTTACTAATGGACGTGTACCTCAATCTCTAACAGAAATACGAGGATTGGTTTGTGAGGATATCACTGGAGGCCAAGAAGATACGCCCATTCCAGCTACAAATTTGGTTGATGACCCCCCTGTTCTACCCACAGGTTTCACATATTGTAAGTCTCTTAAGGTTGCAAAAAATGTGAAGCTTCCCATGAATGCCACCGGATGCAAATGTAAAGGCATTTGTAATGACCCAACAACCTGTGCATGTGCATTGCGTAATGGCTCCGATTTTCCCTATGTATTTCGTGATGGTGGCAGGTTAGTTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCCCAATGTGGTTGTGATCCAGGTTGTGTGAACCGAACTTCTCAAAGAGGACTTAGATATCGTCTGGAGGTTTTCCGTACTGCAAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACAGGAATACTTGGTAGGACAGAAGATATGGAAAGTGTACTAGAAAACAATTATATTTTTGAGATAGATTGCTTGCAAACGATTAAAGGGCTCGGGGGAAGAGAGCGGCGGTCACAAAACGGAGAGATTCCTGCAAATCTTCTGGACAAATATGATGACCAATGTTCTGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAACATTGCCAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTCGTTCAATGTGTTTTGAGCACACATGAAGATTTGCGATTGGCTCGCGTAATGCTGTTTGCTGCTGACAACATACCCCCTTTGCAGGAATTAACATATGACTATGGTTATGTGCTTGATAGCGTCTTGGACTCTGATGGGAAGATCAAGCAAATGGCATGCTATTGTGGAGCCTCAGGCTGCAGGAAGCGATTATTCTAA 2136 0.4382 MVVQSLDAVHQHLMVSSRVEKISESKVTMLANGGNGAPAERKLRQLEVSTAPRRSSARIQALQKAELELRARKKSKVVEEEKENCNGDAAVAKKRRKSSSSSGGEESVAVAVLPLKKKPTASSKGKVEEVNDKSKVEAVNGKEELENVGGVLGEKSDFLKVKETIRLFNKHYLHLVQEEEKRCGKADAERKAAKKASKLKKGAPPEESKNTAKRPDLKAVSKMMENNEILHPVKRIGNIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYEFPVAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLNGDKRQIRDQKLERGNLALKNCAEQCVSVRVIRGHESSSSYTGKVYTYDGLYKVVNCWAEKGISGFTVYKFRLRRLEEQPTLTTNQVYFTNGRVPQSLTEIRGLVCEDITGGQEDTPIPATNLVDDPPVLPTGFTYCKSLKVAKNVKLPMNATGCKCKGICNDPTTCACALRNGSDFPYVFRDGGRLVEAKDVVFECGPQCGCDPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDMESVLENNYIFEIDCLQTIKGLGGRERRSQNGEIPANLLDKYDDQCSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHEDLRLARVMLFAADNIPPLQELTYDYGYVLDSVLDSDGKIKQMACYCGASGCRKRLF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1091 711 SMART preset_2 420 516 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed9g1091 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 53 710 - -
Aed9g1091 711 Coils Coil 64 84 - -
Aed9g1091 711 SUPERFAMILY SET domain 417 687 IPR046341 -
Aed9g1091 711 SUPERFAMILY PUA domain-like 219 409 IPR015947 -
Aed9g1091 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 53 710 - -
Aed9g1091 711 ProSiteProfiles YDG domain profile. 237 389 IPR003105 -
Aed9g1091 711 MobiDBLite consensus disorder prediction 186 216 - -
Aed9g1091 711 Pfam SAD/SRA domain 236 393 IPR003105 -
Aed9g1091 711 ProSiteProfiles Post-SET domain profile. 695 711 IPR003616 -
Aed9g1091 711 SMART set_7 532 687 IPR001214 GO:0005515
Aed9g1091 711 Pfam SET domain 543 681 IPR001214 GO:0005515
Aed9g1091 711 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 67 711 IPR025794 GO:0016571
Aed9g1091 711 SMART G9a_1 232 393 IPR003105 -
Aed9g1091 711 Gene3D - 219 406 IPR036987 -
Aed9g1091 711 MobiDBLite consensus disorder prediction 79 107 - -
Aed9g1091 711 Gene3D SET domain 413 711 IPR046341 -
Aed9g1091 711 Coils Coil 176 196 - -
Aed9g1091 711 ProSiteProfiles SET domain profile. 532 681 IPR001214 GO:0005515
Aed9g1091 711 Pfam Pre-SET motif 424 524 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed9g1091 711 ProSiteProfiles Pre-SET domain profile. 467 529 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed9g1091 711 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1091 Aed-Chr9 8072024 8090883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1091 223 711 EF-hand Containing Proteins AT5G13960 66.395 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed9g1091 SAD_SRA 1.1e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1091 K11420 - gmx:100795584 1185.63