Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1084 ATGGATCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCATTCTTCTCTTCTCTTCTTCTTTTTTACTTTAAATCACGCAAATGCCCTCAATGCTTCTACTACTACTATTCCTCGCGACGCATTGTCCCTTCTCAGCTTCAAACGCTGCGTCTCTTCCGACCCTTCCAACCTCCTCGCCGCCTGGACCAGCCGCACCTCCTCAAATATCTGCCGCTGGCGCGCCGTCGCGTGCGGTGGCGCCGGCAGAGTCACCGCCCTCAACGTGACCGGCCTCCGCGGCGCCGAGCTGTCACCCTCCGTCGGCGACTTGTCCCAGCTCCGCGTCCTCTCCCTCGCCGGAAACATGTTCTCCGGCGAGATTCCGGCGAGCTTATGGAATCTCCGGTTTCTCGAGGCTCTTGAGCTTCAAGGTAACAACTTTTCAGGGAAAATCCCGAACCGGATGAGTTTTACTTTACTTCAATCTCTTCAGCTTGTTAACCTCTCTGGTAATGCCTTCTCTGGTTCGATACCAAGTGAAATTATTGGCTCTGGGAATGTAAAAATCGTTGATTTATCGAATAATCAGTTTTCTGGTGTGATTCCAGTGAATGGTAGTTGTGATTCCTTGAGGCATTTGAGGTTGTCGCATAACTTTTTGACTGGAGAGATTCCACCCCAAATTGGGGAATGTAGAAACTTGAGGACCCTTTTGGTTGATGGGAACATCTTAGAAGGTAGAATCCCTTCTGAGATTGGCCATATTGCTGAACTCAGAGTTCTAGATGTTTCTAGAAACTCCCTCACTGGAAGGGTCCCCAAGGAGTTGGCTAATTGTGTGAAACTGTCTGTGCTTGTGCTCACTGATTTGTTTGAGGATCGTGGCAGCGGTGACGAGGGAGGAGGCTTGAAGGATGGCTTTAGAGGAGAGTTCAATGCCTTTGTTGGGAACATACCTCACCAGGTGTTGCTGCTTTCGAGTCTGAGGGTTTTGTGGGCGCCAAGGGCGAATCTCGGTGGACGGTTGCCTAGTGGCTGGTCGGATTTGTGCTCTCTGAGGGTGCTCAATTTGGCACAGAATTATGTTTCCGGTGTTGTGCCGGGGAGTTTGGGGGTGTGTAGAAATTTAAGTTTCTTGGACTTGAGTTCTAACAATTTGGTGGGGTATCTGCCTTCATTGCAGCTTCAGGTTCCTTGTATGATGTACTTCAATGTCAGCAAGAATAATATATCTGGCACTCTTCAAGGATTTAGGAATGAAAGCTGTGGTGTGAGTGCACTATACCCATCATTCCCAGAGTTGGAGGGTTTTAATGTTTGGAGGTTTCAAAAGAATGCTCTCATTGGATCTGGTTTGGAAGAGTCCAACACTATTGTTGTTAGTCATGATTTCAGTTGGAACAGTTTCGTGGGATTCTTACCTTTATTTTCTCTTGGAGATAATCTGTTTGGTGCAAATCGTAAGGTCTCCTACGCACTGTCTCTCAGTAATAATAAGTTCAATGGAACTCTTCCATATCAGTTGGTTTCAAACTGTAATGACCTCAAGACATTGTCAGTTAACTTGAGTGTGAACCAACTATCCAGTGGGAATGGACAAGCATCGTTTTTGGGGTGCCGGAAGTTGACAGATTTTGAAGCAGCATACAACCAGATTGATGGGTCAATTGGAGCTGGTATAGGAAATGCACACCTGCACTCTTGCCCCGATCCATATTCTGACTCACCTGCTTCTCTTCCATTCCCCCTTGAAATCCAGCATATGCATAGACGGAGGAAATTAAGGACAGTGGTTATTGCTGTGGTCACTTCTGCTTCTGTGACTCTCTGCACACTTTTGGTAATAGTATTGGCGATATTCTCTCGAAGGAGTAAATTTGGCCGGCTTAGCAGTATTAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAACTGAATTGAGTTATGATAGTGTGGCCACAGCTACCGGAAATTTCAGCATCCGGTATCTAATTGGCACAGGCGGCTTTGGGTCAACGTACAAGGCAGAACTGTTCCCAGGTTTTCTTGTTGCCATAAAGAGGTTGTCCATTGGTAGATTTCAAGGCATTCAACAGTTTGAAACAGAAATAAGGACATTAGGCAGAATTCGACACAAGAATCTTGTGACTCTTGTTGGCTATTATGTAGGAAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGTGGGAACCTTGAAGCCTTCATACATGACAGTCATGCTGAACAGCAATGGGATGCTGCTTTGGTTTGCTTCAAAATTCTTGACCGGATGATTTGCAAAATGTTGCAGCTTCAGCAAATGCAAAGCTCTTATCATGATCAGTTATTTAATGCCTCTTGGAATCTCATCATAGTGGCCAACACACGAGTTGTTCCTGTTACTACTGCAAAGCCTATGTTCCTCTTTTCACATTTGTGCCAGCAGTTTTCACACTATCTGAAGTAA 2451 0.4561 MDLLPLLLLLLLHSSLLFFFFTLNHANALNASTTTIPRDALSLLSFKRCVSSDPSNLLAAWTSRTSSNICRWRAVACGGAGRVTALNVTGLRGAELSPSVGDLSQLRVLSLAGNMFSGEIPASLWNLRFLEALELQGNNFSGKIPNRMSFTLLQSLQLVNLSGNAFSGSIPSEIIGSGNVKIVDLSNNQFSGVIPVNGSCDSLRHLRLSHNFLTGEIPPQIGECRNLRTLLVDGNILEGRIPSEIGHIAELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLFEDRGSGDEGGGLKDGFRGEFNAFVGNIPHQVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVSGVVPGSLGVCRNLSFLDLSSNNLVGYLPSLQLQVPCMMYFNVSKNNISGTLQGFRNESCGVSALYPSFPELEGFNVWRFQKNALIGSGLEESNTIVVSHDFSWNSFVGFLPLFSLGDNLFGANRKVSYALSLSNNKFNGTLPYQLVSNCNDLKTLSVNLSVNQLSSGNGQASFLGCRKLTDFEAAYNQIDGSIGAGIGNAHLHSCPDPYSDSPASLPFPLEIQHMHRRRKLRTVVIAVVTSASVTLCTLLVIVLAIFSRRSKFGRLSSIRRRQVVTFQDVPTELSYDSVATATGNFSIRYLIGTGGFGSTYKAELFPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLVGYYVGKAEMFLIYNYLSGGNLEAFIHDSHAEQQWDAALVCFKILDRMICKMLQLQQMQSSYHDQLFNASWNLIIVANTRVVPVTTAKPMFLFSHLCQQFSHYLK 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1084 816 SUPERFAMILY L domain-like 36 282 - -
Aed9g1084 816 ProSiteProfiles Protein kinase domain profile. 652 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1084 816 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 16 558 - -
Aed9g1084 816 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 554 746 - -
Aed9g1084 816 Gene3D Phosphorylase Kinase; domain 1 615 727 - -
Aed9g1084 816 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Aed9g1084 816 Pfam Protein tyrosine and serine/threonine kinase 656 747 IPR001245 GO:0004672|GO:0006468
Aed9g1084 816 Gene3D Ribonuclease Inhibitor 199 286 IPR032675 -
Aed9g1084 816 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 554 746 - -
Aed9g1084 816 Gene3D Ribonuclease Inhibitor 37 198 IPR032675 -
Aed9g1084 816 SUPERFAMILY L domain-like 305 555 - -
Aed9g1084 816 Gene3D Ribonuclease Inhibitor 298 410 IPR032675 -
Aed9g1084 816 SUPERFAMILY Protein kinase-like (PK-like) 630 750 IPR011009 -
Aed9g1084 816 SMART LRR_typ_2 248 272 IPR003591 -
Aed9g1084 816 SMART LRR_typ_2 342 365 IPR003591 -
Aed9g1084 816 SMART LRR_typ_2 200 224 IPR003591 -
Aed9g1084 816 SMART LRR_typ_2 103 127 IPR003591 -
Aed9g1084 816 SMART LRR_typ_2 153 177 IPR003591 -
Aed9g1084 816 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 558 - -
Aed9g1084 816 Gene3D Ribonuclease Inhibitor 411 562 IPR032675 -
Aed9g1084 816 Pfam Leucine Rich Repeat 202 222 IPR001611 GO:0005515
Aed9g1084 816 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1084 Aed-Chr9 7994228 7999288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1084 331 776 Receptor kinase-like Gene Family AT3G02130 31.707 1.32e-47 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Aed9g1084 PK_Tyr_Ser-Thr 7.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1084 - - gmx:100795047 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1084 9 7994228 7999288 Aed9g1084 9 7994228 7999288 ECH