Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1081 ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATAATTCTTATATGGTTTTGTTTGTCTCGTCAAAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCCAGTGGGAAGACATGGTGCAATTGAGTTGCCTATACGAGATACTAGGCGATTTGAGATGGAAGAACTATCTCAGGCCACAAAAAGTTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTTGGGGAGGTATACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTTGCTAGTCAGGAATTTGTTGATGAGGTACGCTATCTCTCATCTATTCACCATCGGAATCTCGTCAGTCTCTTAGGCTACTGCCAGGAGAACAATCTTCAGTTTCTTATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAACCGCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCCGCTAAAGGTTTGGCTCATGTTCACTCTTTGAGTCCCCGTTTGGTGCATAAGGATTTCAAAACCGCTAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTGGCAGATGCTGGACTTCGCAATTTTTTGGGGAGAGTTGACATTGCAGGCTCCTCCTCTTCTCAAGAGGCAACAGATGAAATATTCCTTGCATCAGAGTAA 750 0.44 MSSTLAAIFGGAAGAVALVGIAIILIWFCLSRQRNVSRTSETGSSDPSPVGRHGAIELPIRDTRRFEMEELSQATKSFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQPREKLEFKHRLSIAQGAAKGLAHVHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSSQEATDEIFLASE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1081 249 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Aed9g1081 249 SUPERFAMILY Protein kinase-like (PK-like) 58 229 IPR011009 -
Aed9g1081 249 Pfam Protein tyrosine and serine/threonine kinase 82 226 IPR001245 GO:0004672|GO:0006468
Aed9g1081 249 ProSiteProfiles Protein kinase domain profile. 78 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1081 249 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 249 - -
Aed9g1081 249 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 249 - -
Aed9g1081 249 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
Aed9g1081 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Aed9g1081 249 Gene3D Transferase(Phosphotransferase) domain 1 151 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1081 Aed-Chr9 7971500 7975077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1081 15 230 Receptor kinase-like Gene Family AT5G56890 37.551 2.82e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Aed9g1081 PK_Tyr_Ser-Thr 6.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1081 - - gmx:100305436 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1081 9 7971500 7975077 Aed9g1081 9 7971500 7975077 ECH