Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1072 ATGAAGAAGAAGCAAGCGACAACGACATCACAGGAGGCACAGAAAACGGCGTCGTCATGGGGAGGGAGGTACCTCGGCGTTCGGAGGAGGCCGTGGGGGAGGTACGCGGCGGAGATTCGCGACCCTTCCACGAAGGAGCGCCACTGGCTCGGCACCTTCGACACCGCCGACGAAGCCGCGCTCGCCTACGACAGAGCCGCACGTGGCATGCGCGGCTCACGTGCCCGCACCAACTTCGTCTACGGCGACGCCGCCCCCGGCTCGTCCGTCACCCCCATCGTGTCCCCCGACCAACCTCAACACGACCCGTTTTCCCTCCTGCCCTTCTTCCCCTCCGGTTCTGCCAGCGTGGCAGGTTCTCATCAGTTTAGTCAACAACAAGTGTTTTATTCAGATGATAATAATAGCGAAATAGAGCTTCCTCCGTTGCCACCGGATATTACTAGCTCCATGGGTTATGAATATGAAGGAGGGTATTATTGGGAAGAGGATAATAATAATAATCCAATGTTTAGCACAATGCCAACAACACTGTCAGTGTCAGAGAATGAGATTGCAGCAGCAGGGTCATCGTCTCATCAAGTTTTCGATTTCGGAAGCTCCACCTCCTATTTCTTCTGA 621 0.5507 MKKKQATTTSQEAQKTASSWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTADEAALAYDRAARGMRGSRARTNFVYGDAAPGSSVTPIVSPDQPQHDPFSLLPFFPSGSASVAGSHQFSQQQVFYSDDNNSEIELPPLPPDITSSMGYEYEGGYYWEEDNNNNPMFSTMPTTLSVSENEIAAAGSSSHQVFDFGSSTSYFF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1072 206 Pfam AP2 domain 24 72 IPR001471 GO:0003700|GO:0006355
Aed9g1072 206 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Aed9g1072 206 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Aed9g1072 206 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 131 - -
Aed9g1072 206 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Aed9g1072 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 4 131 - -
Aed9g1072 206 MobiDBLite consensus disorder prediction 1 20 - -
Aed9g1072 206 CDD AP2 23 79 IPR001471 GO:0003700|GO:0006355
Aed9g1072 206 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Aed9g1072 206 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Aed9g1072 206 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1072 Aed-Chr9 7886578 7887198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1072 7 175 AP2-EREBP Transcription Factor Family AT5G13910 49.744 3.21e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed9g1072 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1072 K09286 - gmx:100792421 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1072 9 7886578 7887198 Aed9g1072 9 7886578 7887198 ECH