Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1069 ATGAGTTTTCAAGACATCCAAGGTGGGCCCAATCCTCCCTCTCGCCGGAGCCAGTCGCCGTCGCAGGCCGTGGCTGCCGGGATTTTCCAGATCAACACCGCCGTCGCTACTTTCCGGCGACTCGTCGATGGAGTTGGAACCGTCAAAGACACTCCCGAACACCGCCAGAAGCTGCACAACACGAGGCAGAGAATATTGCAGCTGGTGAAGGACACTTCTGCTAAGCTCAAATCCTTGACTGATTCTGATCGTGATGCTAATGCCAATGCTAGTAAGAAAATCGAGGATGCTAAGCTTGCAAGAGATTTCCAAACCACTTTGCAAGAGTTCCAGAAAGTACAACAGCTCGCTTCGGAGCGCGAATCAACTTACACCCCTGCTTCCCCTTCTTCTTCTTTACCAACAAGCTCTGGCTCTGGTGAAGAATCGGTTGGCATAGACGTGGAAAGCCAACCTTTTATTAGAGAGCAGAAGAGGCAAGAGATACTTCTATTGGATAATGAAATATCCTTCAACGAGGCCATGATTGAGGAAAGAGAACAGGGAATTAGAGAGGTAGAAGAGCAAATTGGACAAGCAAATGAAATATTCAGGGACCTAGCTGTTCTGGTTCATGATCAGGGTGTTGTTATTGATGATATTCAATCAAATATTAATGCTTCTGCTGGTGCAACAACCCAAGCTAGGTGTTGGTGGGTGCTTGCAATTTTTGTGATCGTGCTGGTCATCTTACTTATTGTAATCATTCTTTAG 753 0.4675 MSFQDIQGGPNPPSRRSQSPSQAVAAGIFQINTAVATFRRLVDGVGTVKDTPEHRQKLHNTRQRILQLVKDTSAKLKSLTDSDRDANANASKKIEDAKLARDFQTTLQEFQKVQQLASERESTYTPASPSSSLPTSSGSGEESVGIDVESQPFIREQKRQEILLLDNEISFNEAMIEEREQGIREVEEQIGQANEIFRDLAVLVHDQGVVIDDIQSNINASAGATTQARCWWVLAIFVIVLVILLIVIIL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1069 250 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Aed9g1069 250 PANTHER SYNTAXIN 13 249 IPR045242 -
Aed9g1069 250 PANTHER SYNTAXIN-22-LIKE 13 249 - -
Aed9g1069 250 Gene3D - 174 230 - -
Aed9g1069 250 SMART SynN_4 8 122 IPR006011 GO:0016020
Aed9g1069 250 Coils Coil 176 196 - -
Aed9g1069 250 MobiDBLite consensus disorder prediction 115 144 - -
Aed9g1069 250 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 219 IPR000727 -
Aed9g1069 250 MobiDBLite consensus disorder prediction 1 22 - -
Aed9g1069 250 CDD SNARE_Qa 176 228 - -
Aed9g1069 250 SMART tSNARE_6 168 228 IPR000727 -
Aed9g1069 250 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Aed9g1069 250 MobiDBLite consensus disorder prediction 115 147 - -
Aed9g1069 250 Gene3D - 12 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1069 Aed-Chr9 7844853 7848017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1069 1 249 SNARE and Associated Proteins AT5G46860 56.809 1.22e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1069 - K08488 gsj:114389394 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1069 9 7844853 7848017 Aed9g1069 9 7844853 7848017 ECH