Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1048 ATGATTGGTGCAATAAAAGCAGCAATTGGAGACGCGGTGTTGACTTTCATGTGGGTGTTCTGTTCCTCAGTGTTGGGAATTGCTTCTGGGTACATAACCAATGCCCTTAACCTTCAGAACATCACCTACAATGGGTTCCCTTACCCTTCTTTTCTTGTCACCACCACACTAGTTTTTTTACTCGTTTTTCTCTTCACCATCATTGGGAATGTCCTTGGTGGTGCTAGCTTCAACCCCACCGGCACCGCTTCCTTCTACGCCGTTGGTCTTGGCTCCGACACGCTCTTCTCAATGGCGCTTCGCTTCCCTGCGCAGGCAGCTGGTGCCGTGGGTGGTGCAGTGGCAATCATGGAAGTGATTCCTGCGAAGTACAGGCACAAGATTGGAGGGCCTTCTTTGAAAGTGGATTTACACACCGGGGCTATCGCTGAAGGGGTGTTGACCTTTGTGATCACCTTTGCCGTTCTCCTCATCTTCCTCAAGGGCCCTCGTAGTGACTTGTTGAAGACTTGGTTGCTGGCCACGGCAACGGTGGTTTTGGTCATGGTTGGATCTGCCTACACCGGGCCAGCCATGAATCCTGCCAACTATAGTTTCTTCTTCATTCTCTCTTCTGTTTCTGAACTCTACCTTTCAGCTTATAATTAA 648 0.4969 MIGAIKAAIGDAVLTFMWVFCSSVLGIASGYITNALNLQNITYNGFPYPSFLVTTTLVFLLVFLFTIIGNVLGGASFNPTGTASFYAVGLGSDTLFSMALRFPAQAAGAVGGAVAIMEVIPAKYRHKIGGPSLKVDLHTGAIAEGVLTFVITFAVLLIFLKGPRSDLLKTWLLATATVVLVMVGSAYTGPAMNPANYSFFFILSSVSELYLSAYN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1048 215 Gene3D Glycerol uptake facilitator protein. 3 208 IPR023271 -
Aed9g1048 215 PANTHER AQUAPORIN SIP1-1 3 196 IPR044222 GO:0015250
Aed9g1048 215 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g1048 215 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g1048 215 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g1048 215 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g1048 215 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g1048 215 SUPERFAMILY Aquaporin-like 4 195 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1048 Aed-Chr9 7610217 7613896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1048 1 195 Major Intrinsic Protein MIP AT3G04090 57.436 4.16e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1048 K09875 - gmx:100792787 332.413