Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1043 ATGAATTTCCTCTTGTTGCCACGGACAAAGAGCATGGCTTTCCTATCACTGATCATTACTTTTCTACTACTCCTCTCATTGACACCACCCACTTCCTCGCAACTTCTCCAGAACAACATACTCAGAAATCGTAAGATATTTCCCAACAAATTACAGGAAGAAATTACCTCTTATGCTGTCATCTTTGATGCTGGTAGCAGTGGAAGCCGTGTGCATGTCTTCCATTTTGACCAGAACTTAAATCTCCTTCACATTGGCCCTGAACTTGATTTTTCTAAAAAGGCAACAGCAGGTTTGAGGATTTTGGAAGGAGATGCTGCTGAAAATATATTGCAAGCGGTTAGGGAAATGTTCAAGAACAGAACTACCCTAAACGTTCAACCTGATGCAGTAGCTGTTATTGATGGAACCCTAGAAGGTTCTTATCTATGGGTGGCAGTTAACTATCTATTAGAGAAGTTGGGAAAGAAGTTTACAAAAACGGTGGGAGTAATTGATCTTGGAGGAGCATCGGTTCAAATGGCCTATGCTGTCTCAAGGAACACTGCTAAAAACGCTCCAAAACCACCACAAGGACAAGAACCATACATGAAGAAGCTTCTACTCAAGGGAAAGAAATATGACCTTTATGTTGCGGATGGTTCTGCTAGTCCTTGCCTTTTAGCTGGCTATGATGATATCTACAAGTATTCGGGAGAAAAATACAGGGCCTATGCCCCAACTTCTGGTGCCAACTATGATGAATGCCGAGAGATAGCTCTTCAGATTCTGAGAGTGAATGAGGCATGTCCCCAAAATCAAAATTGTACATTTTCTGGGATATGGGATGGTGGAAGAGGAAGTGGACAGAAAAATCTTGTTGTTACGTCTTCTTTCTACTATAGGTCTTCAGAGTCTGGAATCGTTGATATAAAGAAACCCAATTCCAAAGTTCGTCCAGTGGATTGGGAAATTGCAGCAAAACAAGCTTGTAAAGTATCATTTGAGGATGCCAAAACCGCTTATCCAAATGTTCACAAATCGAAACTTCCATATGTGTGCCTGGATCTTACATACCAATATACATTACTCGTTGATGGATTTGGCCTAGATCCAGAGCAAGTGATAACAGTGGCTGAAGGAATTGAATATCAAAATGCTGTTGTGGAAACAGCATGGCCTCTAGGAAATGCCATAGAAGCCATATCATCTTTGCCTAAATTTGAACCGTTGATGTATTTTATTTAG 1227 0.4083 MNFLLLPRTKSMAFLSLIITFLLLLSLTPPTSSQLLQNNILRNRKIFPNKLQEEITSYAVIFDAGSSGSRVHVFHFDQNLNLLHIGPELDFSKKATAGLRILEGDAAENILQAVREMFKNRTTLNVQPDAVAVIDGTLEGSYLWVAVNYLLEKLGKKFTKTVGVIDLGGASVQMAYAVSRNTAKNAPKPPQGQEPYMKKLLLKGKKYDLYVADGSASPCLLAGYDDIYKYSGEKYRAYAPTSGANYDECREIALQILRVNEACPQNQNCTFSGIWDGGRGSGQKNLVVTSSFYYRSSESGIVDIKKPNSKVRPVDWEIAAKQACKVSFEDAKTAYPNVHKSKLPYVCLDLTYQYTLLVDGFGLDPEQVITVAEGIEYQNAVVETAWPLGNAIEAISSLPKFEPLMYFI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1043 408 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 134 149 IPR000407 GO:0016787
Aed9g1043 408 Gene3D Exopolyphosphatase. Domain 2 135 211 - -
Aed9g1043 408 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 12 98 - -
Aed9g1043 408 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 95 408 - -
Aed9g1043 408 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 88 IPR000407 GO:0016787
Aed9g1043 408 Pfam GDA1/CD39 (nucleoside phosphatase) family 217 399 IPR000407 GO:0016787
Aed9g1043 408 Pfam GDA1/CD39 (nucleoside phosphatase) family 94 211 IPR000407 GO:0016787
Aed9g1043 408 Gene3D - 94 134 - -
Aed9g1043 408 Gene3D Exopolyphosphatase. Domain 2 214 375 - -
Aed9g1043 408 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 98 IPR000407 GO:0016787
Aed9g1043 408 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 95 408 IPR000407 GO:0016787
Aed9g1043 408 Gene3D - 47 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1043 Aed-Chr9 7567937 7572866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1043 57 397 Calmodulin-binding Proteins AT3G04080 46.020 4.94e-116 345