Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1025 ATGCCAGAGCTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGAGATCTTCAACCTGGTCCACTGCCTGTTGATCAAGGAGAGAATTGGCAACAACCTGCTCCGACTCGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGCGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACTAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAAGTCGTGCCAGAACCTGTTGCTTTAGGGGCTCTGGAACCAGTTTACAATCACGTAGAGGTAGTGGCCAATAATAATATTACAATGGAGGGTGCAAGTCCAGAAAAGGTGGCAGCGGGAGCTGAAGAAGAACCAAGCACGACTCCTGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTATATATAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGTCAAGTTTATGTTGGCCGAAGGTTAAGTGGTGGCTCTGATCGAACAGGTCCTGATGCGGTTGAGGTTGCACTTAAGTTTGAGCACCGAAACAGTAAAGGTTGCAATTATGGGCCTCCATATGAATGGCAAGTTTACAGCACTCTGAATGGCTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGGCAAGGAGATTTCTACATTTTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTGTTGGTCAACAAATGTCTCCAAATATGGTTGCGTGCATTGCAGTGGAGTCAATATCAATTCTTGAGAAGCTCCACTTGAAAGGGTTTGTGCATGGAGATGTGAAACCTGAAAACTTTTTACTTGGTCAACCTGGATCACCTGATGATAAGAAGTTATATCTCATTGATCTTGGTCTGGCTTCTAGATGGAAGGATGCATCATCTGGTCTGCATGTTGATTATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATACACTTTAATATTTCTCATAAAAGGGCGATTACCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGTCCACTTCCTCAGAGATAATGTGCTGCTTTATTCCTGCTCCATTTAAGCAGTTTCTTGAAGCTGTTACTAGTATGAGATTTGACGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGAAAGCTTGATTGAACCATGCACTCCATTGAGACCTATTAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAACCTAAGAAGAAAGTGCGATTGGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCTATGAAGCAGAGATATCACTATAATGTTGCAGACACTAGGCTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTGCAGCAAATTTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCACAAGTTTATGAGTTATCCCCAGCCTTCCTGCCCAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGCGCAGTTAACGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAGTCCTACAAAGTGAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCAATGACTACTGCTGGCAGTCGCTGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCGAGTGAAGGAATCCATCGCCGATGGGAGAATGGTTACAGGATCACTTCTATGGCTGCTACTAGTGATCAGGGAGCCTTCATACTGAGCATACCGAAACGCAAATTGCTTGATGAAACTCAGGAGACATTGCGTACATCTGCTTTCCCCAGCACCCATGTTAAGGAAAAATGGGCCAAGAATCTCTACATTGCCTCTATATGTTATGGGCGAACAGTTTGCTAG 2130 0.4488 MPELRSGARRSKRLGDLQPGPLPVDQGENWQQPAPTRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEVVPEPVALGALEPVYNHVEVVANNNITMEGASPEKVAAGAEEEPSTTPVPERVQVGNSPIYKIERKLGKGGFGQVYVGRRLSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSVGQQMSPNMVACIAVESISILEKLHLKGFVHGDVKPENFLLGQPGSPDDKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSSEIMCCFIPAPFKQFLEAVTSMRFDEEPNYSKLISLFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASAANLWALIMDAGTGFSSQVYELSPAFLPKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENGYRITSMAATSDQGAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1025 709 ProSiteProfiles Protein kinase domain profile. 148 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1025 709 SMART serkin_6 148 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1025 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Aed9g1025 709 PANTHER OS01G0772600 PROTEIN 102 683 - -
Aed9g1025 709 Gene3D Transferase(Phosphotransferase) domain 1 111 465 - -
Aed9g1025 709 MobiDBLite consensus disorder prediction 1 73 - -
Aed9g1025 709 Pfam Protein kinase domain 148 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1025 709 ProSitePatterns Protein kinases ATP-binding region signature. 154 185 IPR017441 GO:0005524
Aed9g1025 709 PANTHER CASEIN KINASE-RELATED 102 683 - -
Aed9g1025 709 SUPERFAMILY Protein kinase-like (PK-like) 148 436 IPR011009 -
Aed9g1025 709 CDD STKc_CK1 148 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1025 Aed-Chr9 7393941 7402493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1025 119 308 EF-hand Containing Proteins AT5G66210 27.363 2.14e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed9g1025 Pkinase 1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1025 - - gmx:100801967 1368.99