Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1021 ATGAAGAAGAGGGTGTGGATTGCACGAATAAGGCATAAGAGGTTGCGGTGGCATGGTGGCGAAGGCATGGCGACTAAGGCGAGGGAGAAAGCAGCCAATTCCAGCCACTTCCACTCTGCTGCACCCTCCACCTGGACCAGCCCTCCTCGCCGGCGGTCCCCACTCGTCGTGGCATCCTCTTCGTCGTCCGCGGCCGTTAACGGTGGCCAGAACCACTACGCCGTTCTCGGCGTCGCCGACACTGCCACCACCGTCCAAATCAAGCGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCTGATGTTAGCAAGGATCCACATGCTGCTGAATTATTCAAGAGCATTCATTATGCATATGAAGTCCTATCTAATGAAGCAACAAGAGTTCAGTATGATCAAGATCTTCAATTCGGTCACAAGCCTTACAGGGAAAAATGGAGCTACAGCACTGAATTTGAAGATCAGGCAAGAGTCTATAGGTGGGACCGCCTGAGTAAAAAAATGGATAGCGAAAGATACAGGGAGCATTACAATGTCAATGAGGACTACACCAGTGAAACAGATGAGGAAGAAGATGAAGTAAATTTAGATGAAGAGAGGGGTTCTTTCATTGAAGTGCTTAAATCAGCATTCATGTCACTATTTTTGTTTCAGACATTTGGATCCAGACTCTCACTCACATTTAGCAGTCTGATGGCATTGTTCGATAAGAAGTTGGACACCGGCTATAAAATTGGCTTTGTAATGGCATGGATTTTGGGTGGGAGAGGTGGCATATTGTTAACACTGTGCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGCAGTGTTGTTGCACTAGTTGTGGTGGCCATGTGGGTTGGCTCCAACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCTCTTCTCTACATGTCCATTAAGCTACAATCTGACCTAATATAA 960 0.4781 MKKRVWIARIRHKRLRWHGGEGMATKAREKAANSSHFHSAAPSTWTSPPRRRSPLVVASSSSSAAVNGGQNHYAVLGVADTATTVQIKRAYRLLARKYHPDVSKDPHAAELFKSIHYAYEVLSNEATRVQYDQDLQFGHKPYREKWSYSTEFEDQARVYRWDRLSKKMDSERYREHYNVNEDYTSETDEEEDEVNLDEERGSFIEVLKSAFMSLFLFQTFGSRLSLTFSSLMALFDKKLDTGYKIGFVMAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVAMWVGSNLARYAPLPQGALLALLYMSIKLQSDLI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1021 319 MobiDBLite consensus disorder prediction 36 52 - -
Aed9g1021 319 MobiDBLite consensus disorder prediction 27 52 - -
Aed9g1021 319 CDD DnaJ 71 124 IPR001623 -
Aed9g1021 319 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Aed9g1021 319 PRINTS DnaJ domain signature 91 106 IPR001623 -
Aed9g1021 319 PRINTS DnaJ domain signature 107 127 IPR001623 -
Aed9g1021 319 PRINTS DnaJ domain signature 73 91 IPR001623 -
Aed9g1021 319 Pfam DnaJ domain 71 132 IPR001623 -
Aed9g1021 319 Gene3D DnaJ domain 57 157 IPR036869 -
Aed9g1021 319 Coils Coil 180 200 - -
Aed9g1021 319 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 305 - -
Aed9g1021 319 SUPERFAMILY Chaperone J-domain 18 131 IPR036869 -
Aed9g1021 319 SMART dnaj_3 70 127 IPR001623 -
Aed9g1021 319 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Aed9g1021 319 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1021 Aed-Chr9 7354130 7362419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1021 56 137 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.558 1.11e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1021 - - gmx:100791619 439.499