Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1010 ATGGAAATTCAATTCCAACAGCCAAAGCAGCAGCAGCAGAAATCAGGCATTGCAGTCACCAAAGGAGGAAAGTTCAAAGGGAGAAGCAAAAACAACAGCAACAACAAATTTGTTGGTGTGAGACAAAGGCCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACTCAGAAGATTAGAATGTGGCTTGGCACATTTGAGACAGCTGAGGAAGCAGCCAAAGCCTATGATGAAGCCGCATGCCTTCTTCGCGGATCCAACACTCGAACCAACTTCATCACTCATGTCTCCTTGGATTCCCCTCTTGCTTCTCGGATTAGAAATCTTCTTAACAACAGAAAAGGCATAAAAAAACAGGAAGATGCTAGTTCTAATGCTAACAATGCACCTTCTCCAAGAGTTAGCACTAGCACTAGTACTAGTACTAGTATTAATTCAAGCAATGGCGATGGCATTGACAACAATGAGAAGTCTCTTTCTAATGTGACAACTCAAAGTTCAAATCTTTTTGATGATGCTTATAAACCAGATTTGAGCAATTGCAGGGAGGAGTTTGAGTCATGTCATCAATCCAATACTTCTACATGGAGTGGTTTTGGACATGTCTTCGATCGTTTTCCTATTGCTCAAATATTCGATATACCAAAGATTGATGATGGCTTCACTAGCACAACCGACTTGGAGCTTTTGGAATTTGAGAGAATGAAAGTTGAGAGACAAATATCAGCTTCACTCTATGCAATTAATGGGGTGCAAGAGTACATGGAAACTGTTCATGACTCCAATGAAACACTCTGGGATCTTCCACCCTTATGCTCATTGTTCTGTGAAACTTGA 837 0.4134 MEIQFQQPKQQQQKSGIAVTKGGKFKGRSKNNSNNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAAKAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKQEDASSNANNAPSPRVSTSTSTSTSINSSNGDGIDNNEKSLSNVTTQSSNLFDDAYKPDLSNCREEFESCHQSNTSTWSGFGHVFDRFPIAQIFDIPKIDDGFTSTTDLELLEFERMKVERQISASLYAINGVQEYMETVHDSNETLWDLPPLCSLFCET 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1010 278 MobiDBLite consensus disorder prediction 1 35 - -
Aed9g1010 278 MobiDBLite consensus disorder prediction 116 159 - -
Aed9g1010 278 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 263 - -
Aed9g1010 278 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Aed9g1010 278 MobiDBLite consensus disorder prediction 1 18 - -
Aed9g1010 278 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Aed9g1010 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 11 263 - -
Aed9g1010 278 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Aed9g1010 278 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Aed9g1010 278 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Aed9g1010 278 MobiDBLite consensus disorder prediction 121 159 - -
Aed9g1010 278 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Aed9g1010 278 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Aed9g1010 278 CDD AP2 36 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1010 Aed-Chr9 7283499 7284335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1010 24 278 AP2-EREBP Transcription Factor Family AT5G19790 43.609 4.24e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed9g1010 AP2 9.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1010 K09286 - gmx:100796898 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1010 9 7283499 7284335 Aed7g0844 7 6412249 6415305 PCT